RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 LIN54Q6MZP7 749 aa4.42□□□□□ -1.7
LINC00397-201ENST00000422074 AAGABQ6PD74 315 aa4.42□□□□□ -1.7
LINC00397-201ENST00000422074 ANKS1BQ7Z6G8 1248 aa4.42□□□□□ -1.7
LINC00397-201ENST00000422074 MORC1Q86VD1 984 aa4.42□□□□□ -1.7
LINC00397-201ENST00000422074 IGFN1Q86VF2 1251 aa4.42□□□□□ -1.7
LINC00397-201ENST00000422074 FAM185AQ8N0U4 392 aa4.42□□□□□ -1.7
LINC00397-201ENST00000422074 SCAMP5Q8TAC9 235 aa4.42□□□□□ -1.7
LINC00397-201ENST00000422074 GABPB2Q8TAK5 448 aaPredicted RBP4.42□□□□□ -1.7
LINC00397-201ENST00000422074 OIT3Q8WWZ8 545 aa4.42□□□□□ -1.7
LINC00397-201ENST00000422074 MEIS3Q99687 375 aa4.42□□□□□ -1.7
LINC00397-201ENST00000422074 DDX23Q9BUQ8 820 aaKnown RBP4.42□□□□□ -1.7
LINC00397-201ENST00000422074 SF3B5Q9BWJ5 86 aaKnown RBP4.42□□□□□ -1.7
LINC00397-201ENST00000422074 PABPC3Q9H361 631 aaKnown RBP4.42□□□□□ -1.7
LINC00397-201ENST00000422074 PDE11AQ9HCR9 933 aa4.42□□□□□ -1.7
LINC00397-201ENST00000422074 WWOXQ9NZC7 414 aa4.42□□□□□ -1.7
LINC00397-201ENST00000422074 LRCH1Q9Y2L9 728 aa4.42□□□□□ -1.7
LINC00397-201ENST00000422074 AGAP5A6NIR3 686 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 LACTBL1A8MY62 500 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 PRR23D1E9PI22 279 aaPredicted RBP4.41□□□□□ -1.7
LINC00397-201ENST00000422074 LCATP04180 440 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 PRR23D2P0DMB1 279 aaPredicted RBP4.41□□□□□ -1.7
LINC00397-201ENST00000422074 GYS1P13807 737 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 ARSBP15848 533 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 MLH1P40692 756 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 PCP4P48539 62 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 OAZ1P54368 228 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 SELENOVP59797 346 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 AP2B1P63010 937 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 FOXO1Q12778 655 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 PUM3Q15397 648 aaKnown RBP4.41□□□□□ -1.7
LINC00397-201ENST00000422074 DUSP6Q16828 381 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 SLC30A9Q6PML9 568 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 SLC16A12Q6ZSM3 486 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 FBXL14Q8N1E6 418 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 ENGASEQ8NFI3 743 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 STT3BQ8TCJ2 826 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 CTAGE1Q96RT6 745 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 Q9N2J8 555 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 KRCC1Q9NPI7 259 aaPredicted RBP4.41□□□□□ -1.7
LINC00397-201ENST00000422074 HIF1ANQ9NWT6 349 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 ZDHHC7Q9NXF8 308 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 WNT16Q9UBV4 365 aa4.41□□□□□ -1.7
LINC00397-201ENST00000422074 GRM8O00222 908 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 HNRNPRO43390 633 aaKnown RBP4.4□□□□□ -1.71
LINC00397-201ENST00000422074 SPRY3O43610 288 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 HLA-DQA2P01906 255 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 CYP21A2P08686 494 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 HOXC6P09630 235 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 TNFSF8P32971 234 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 KCNJ4P48050 445 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 LTBQ06643 244 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 CDK18Q07002 472 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 SLC4A8Q2Y0W8 1093 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 GALNTL6Q49A17 601 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 ARL13AQ5H913 290 aaPredicted RBP4.4□□□□□ -1.71
LINC00397-201ENST00000422074 MTFR2Q6P444 385 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 KIAA1324Q6UXG2 1013 aaKnown RBP4.4□□□□□ -1.71
LINC00397-201ENST00000422074 TMEM217Q8N7C4 229 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 PRR26Q8N8Z3 221 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 OTUD7AQ8TE49 926 aaPredicted RBP4.4□□□□□ -1.71
LINC00397-201ENST00000422074 CPT1BQ92523 772 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 PHF21BQ96EK2 531 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 RMDN3Q96TC7 470 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 B3GNT4Q9C0J1 378 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 ACTR5Q9H9F9 607 aaPredicted RBP4.4□□□□□ -1.71
LINC00397-201ENST00000422074 TMLHEQ9NVH6 421 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 TMEM248Q9NWD8 314 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 ARL15Q9NXU5 204 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 NDUFAF4Q9P032 175 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 RAI2Q9Y5P3 530 aa4.4□□□□□ -1.71
LINC00397-201ENST00000422074 TCF20Q9UGU0 1960 aaKnown RBP4.4□□□□□ -1.71
LINC00397-201ENST00000422074 MST1RQ04912 1400 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.39□□□□□ -1.71
LINC00397-201ENST00000422074 TCRBV7S3A2A0A539 114 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 FAM90A20PA6NIJ5 464 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 NPIPB13A6NJU9 1138 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 NPIPB5A8MRT5 1133 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 BECN2A8MW95 431 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 NPIPB4C9JG80 1138 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 RGS14O43566 566 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 PLA2G2AP14555 144 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 PKMP14618 531 aaKnown RBP4.39□□□□□ -1.71
LINC00397-201ENST00000422074 TNFRSF8P28908 595 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 HOXD3P31249 432 aaPredicted RBP4.39□□□□□ -1.71
LINC00397-201ENST00000422074 ZP1P60852 638 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 ICA1Q05084 483 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 RNASELQ05823 741 aaKnown RBP4.39□□□□□ -1.71
LINC00397-201ENST00000422074 SYCP2LQ5T4T6 812 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 DCAF12L2Q5VW00 463 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 DGAT2L7PQ6IED9 249 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 TRILQ7L0X0 811 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 CTU1Q7Z7A3 348 aaKnown RBP4.39□□□□□ -1.71
LINC00397-201ENST00000422074 RBM23Q86U06 439 aaKnown RBP4.39□□□□□ -1.71
LINC00397-201ENST00000422074 CAMK1DQ8IU85 385 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 SPATA2LQ8IUW3 424 aaPredicted RBP4.39□□□□□ -1.71
LINC00397-201ENST00000422074 RBMXL3Q8N7X1 1067 aaKnown RBP4.39□□□□□ -1.71
LINC00397-201ENST00000422074 PTGR2Q8N8N7 351 aaPredicted RBP4.39□□□□□ -1.71
LINC00397-201ENST00000422074 ELP5Q8TE02 316 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 HDAC7Q8WUI4 952 aa4.39□□□□□ -1.71
LINC00397-201ENST00000422074 FAM84BQ96KN1 310 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms