RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PRLRP16471 622 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 KDELR1P24390 212 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 RFWD2Q8NHY2 731 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 ARL8AQ96BM9 186 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 OTULINQ96BN8 352 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 FAM161BQ96MY7 647 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 TFR2Q9UP52 801 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 GLRA3O75311 464 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 TADA3O75528 432 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 RASSF9O75901 435 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 ATP6V1E1P36543 226 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 KDSRQ06136 332 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 LRRC14Q15048 493 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 PAGE1O75459 146 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 SUPT7LO94864 414 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 GUCA1CO95843 209 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 CRABP2P29373 138 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 BTKQ06187 659 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 PARP15Q460N3 678 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 WDR59Q6PJI9 974 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 FAM43BQ6ZT52 329 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-206ENST00000421141 FTH1P02794 183 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 MPOP05164 745 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 ITGB6P18564 788 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 IL10P22301 178 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 CD151P48509 253 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 KCNK10P57789 538 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 GRTP1Q5TC63 336 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 SCARA3Q6AZY7 606 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 ZNF513Q8N8E2 541 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-206ENST00000421141 GLIS3Q8NEA6 775 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 SERPINB12Q96P63 405 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 CEP41Q9BYV8 373 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 ILKAPQ9H0C8 392 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-206ENST00000421141 ZNF556Q9HAH1 456 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 HBS1LQ9Y450 684 aaKnown RBP10.93□□□□□ -0.66
PTCH1-206ENST00000421141 EIF3HO15372 352 aaKnown RBP eCLIP10.93□□□□□ -0.66
PTCH1-206ENST00000421141 ESRRGP62508 458 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 PFKPQ01813 784 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 FBXO38Q6PIJ6 1188 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 FAM124AQ86V42 546 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 ZNF670Q9BS34 389 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 ELOVL6Q9H5J4 265 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 SLC27A6Q9Y2P4 619 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 MRPL42Q9Y6G3 142 aaKnown RBP10.93□□□□□ -0.66
PTCH1-206ENST00000421141 TYMPP19971 482 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 ALDH18A1P54886 795 aaKnown RBP10.93□□□□□ -0.66
PTCH1-206ENST00000421141 SNCBQ16143 134 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 ARHGAP20Q9P2F6 1191 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 NAALADL1Q9UQQ1 740 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 KRT87PA6NCN2 255 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 NDUFB5O43674 189 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 HAUS5O94927 633 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 PGAM1P18669 254 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 CDK16Q00536 496 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 KYNUQ16719 465 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 PDPK2PQ6A1A2 396 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 KLHL35Q6PF15 583 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 CFAP52Q8N1V2 620 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 MAGEB10Q96LZ2 347 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-206ENST00000421141 GBP5Q96PP8 586 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 SLC39A8Q9C0K1 460 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 NRDE2Q9H7Z3 1164 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 H3BM21 787 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 KATNA1O75449 491 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 TTPAP49638 278 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 MED21Q13503 144 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 GALNTL6Q49A17 601 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 AASDHQ4L235 1098 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-206ENST00000421141 C1orf146Q5VVC0 180 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 C4orf33Q8N1A6 199 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 ARMC2Q8NEN0 867 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 BSNDQ8WZ55 320 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 PCED1BQ96HM7 432 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 NPHS2Q9NP85 383 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 SAGE1Q9NXZ1 904 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 THEGQ9P2T0 379 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 DUSP10Q9Y6W6 482 aa10.93□□□□□ -0.66
PTCH1-206ENST00000421141 TRIM49D1C9J1S8 452 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 C22orf31O95567 290 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 ZSWIM2Q8NEG5 633 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 ACTR5Q9H9F9 607 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-206ENST00000421141 RNASEH2AO75792 299 aaKnown RBP10.92□□□□□ -0.66
PTCH1-206ENST00000421141 EPHX1P07099 455 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 TNNI3P19429 210 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 KCNA3P22001 575 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 ENPEPQ07075 957 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 SH3RF1Q7Z6J0 888 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 ATAD1Q8NBU5 361 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 MIPOL1Q8TD10 442 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 RERGQ96A58 199 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-206ENST00000421141 CMTM5Q96DZ9 223 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 FAXDC2Q96IV6 333 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 CPNE1Q99829 537 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 LRRC72A6NJI9 287 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 COL6A1P12109 1028 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 HTR7P34969 479 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 ST3GAL1Q11201 340 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 MCRS1Q96EZ8 462 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 RAD9AQ99638 391 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms