RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 TMPRSS7Q7RTY8 843 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 SLC47A2Q86VL8 602 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 FAM71AQ8IYT1 594 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 ELF4Q99607 663 aaPredicted RBP17.87■□□□□ 0.45
MSH6-203ENST00000420813 FEM1AQ9BSK4 669 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 KDM4CQ9H3R0 1056 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 SYNCQ9H7C4 482 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 EBF2Q9HAK2 575 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 TMEM51Q9NW97 253 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 SLC25A13Q9UJS0 675 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 VANGL2Q9ULK5 521 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 HS3ST4Q9Y661 456 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 ARID1BQ8NFD5 2236 aaPredicted RBP17.86■□□□□ 0.45
MSH6-203ENST00000420813 APC2O95996 2303 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.86■□□□□ 0.45
MSH6-203ENST00000420813 M0QYT0 321 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 ALOX15BO15296 676 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 LATO43561 262 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 ATP9BO43861 1147 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 CLDN11O75508 207 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 CD38P28907 300 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 DRD3P35462 400 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 ZNF177Q13360 481 aaPredicted RBP17.86■□□□□ 0.45
MSH6-203ENST00000420813 BRMS1LQ5PSV4 323 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 FAM46CQ5VWP2 391 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 GALNT15Q8N3T1 639 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 OR14C36Q8NHC7 312 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 OR8D1Q8WZ84 308 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 NPY6RQ99463 290 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 NDST4Q9H3R1 872 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 AASDHPPTQ9NRN7 309 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 TBC1D30Q9Y2I9 924 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 OR51B4Q9Y5P0 310 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 ADAMTS20P59510 1910 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 CACNA1GO43497 2377 aa17.86■□□□□ 0.45
MSH6-203ENST00000420813 A0A1W2PR77 199 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 TAF4O00268 1085 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 YKT6O15498 198 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 PAGE1O75459 146 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 WNT1P04628 370 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 VAV1P15498 845 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 ERCC5P28715 1186 aaPredicted RBP17.85■□□□□ 0.45
MSH6-203ENST00000420813 CDH5P33151 784 aaPredicted RBP17.85■□□□□ 0.45
MSH6-203ENST00000420813 NUDT1P36639 197 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 SCNN1AP37088 669 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 CDH4P55283 916 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 VWA3BQ502W6 1294 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 SLC45A4Q5BKX6 768 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 OTUD1Q5VV17 481 aaPredicted RBP17.85■□□□□ 0.45
MSH6-203ENST00000420813 TMEM35BQ8NCS4 154 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 OR52K2Q8NGK3 314 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 PGAP3Q96FM1 320 aaPredicted RBP17.85■□□□□ 0.45
MSH6-203ENST00000420813 CCDC86Q9H6F5 360 aaKnown RBP17.85■□□□□ 0.45
MSH6-203ENST00000420813 ARHGEF38Q9NXL2 777 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 VPS28Q9UK41 221 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 STAP1Q9ULZ2 295 aa17.85■□□□□ 0.45
MSH6-203ENST00000420813 C1QTNF3-AMACRE9PGA6 284 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 F9P00740 461 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 PNMA6AP0CW24 399 aaPredicted RBP17.84■□□□□ 0.45
MSH6-203ENST00000420813 CXCR3P49682 368 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 IRAK1P51617 712 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 MIIPQ5JXC2 388 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 ACBD5Q5T8D3 534 aaPredicted RBP17.84■□□□□ 0.45
MSH6-203ENST00000420813 DPY19L2P1Q6NXN4 242 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.84■□□□□ 0.45
MSH6-203ENST00000420813 SH2D3CQ8N5H7 860 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 NT5C3BQ969T7 300 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 SERAC1Q96JX3 654 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 TUBGCP2Q9BSJ2 902 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 CLSTN2Q9H4D0 955 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 WDCPQ9H6R7 721 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 GDF3Q9NR23 364 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 PIGVQ9NUD9 493 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.84■□□□□ 0.454e-9■■■■□ 20.3
MSH6-203ENST00000420813 FTSJ1Q9UET6 329 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 DACH1Q9UI36 760 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 RALYQ9UKM9 306 aaKnown RBP17.84■□□□□ 0.45
MSH6-203ENST00000420813 HS3ST2Q9Y278 367 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 PAXBP1Q9Y5B6 917 aa17.84■□□□□ 0.45
MSH6-203ENST00000420813 CHD5Q8TDI0 1954 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 TBC1D3DA0A087WVF3 549 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 TBC1D3IA0A087WXS9 549 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 TBC1D3EA0A087X179 549 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 TBC1D3KA0A087X1G2 549 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 TBC1D3FA6NER0 549 aaPredicted RBP17.83■□□□□ 0.44
MSH6-203ENST00000420813 TBC1D3LB9A6J9 549 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 MCF2LO15068 1137 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 PLRG1O43660 514 aaKnown RBP17.83■□□□□ 0.44
MSH6-203ENST00000420813 TBC1D3HP0C7X1 549 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 GGCXP38435 758 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 GABRB2P47870 512 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 NUMBP49757 651 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 PPP2CBP62714 309 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 PPP2CAP67775 309 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 IL9RQ01113 521 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 DLG2Q15700 870 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 ACCSLQ4AC99 568 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 TBC1D3GQ6DHY5 549 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 TBC1D3CQ6IPX1 549 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 NAPEPLDQ6IQ20 393 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms