RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 DRICH1Q6PGQ1 229 aaPredicted RBP12.79□□□□□ -0.36
TMEM53-206ENST00000420706 ARHGAP36Q6ZRI8 547 aa12.79□□□□□ -0.36
TMEM53-206ENST00000420706 KIAA0907Q7Z7F0 614 aaPredicted RBP12.79□□□□□ -0.36
TMEM53-206ENST00000420706 ZC3H18Q86VM9 953 aaKnown RBP12.79□□□□□ -0.36
TMEM53-206ENST00000420706 LRRC49Q8IUZ0 686 aa12.79□□□□□ -0.36
TMEM53-206ENST00000420706 APCDD1Q8J025 514 aa12.79□□□□□ -0.36
TMEM53-206ENST00000420706 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.79□□□□□ -0.36
TMEM53-206ENST00000420706 C12orf50Q8NA57 414 aaPredicted RBP12.79□□□□□ -0.36
TMEM53-206ENST00000420706 SPATA4Q8NEY3 305 aa12.79□□□□□ -0.36
TMEM53-206ENST00000420706 LRRN4Q8WUT4 740 aa12.79□□□□□ -0.36
TMEM53-206ENST00000420706 ATG4AQ8WYN0 398 aa12.79□□□□□ -0.36
TMEM53-206ENST00000420706 CHFRQ96EP1 664 aa12.79□□□□□ -0.36
TMEM53-206ENST00000420706 HMCESQ96FZ2 354 aa12.79□□□□□ -0.36
TMEM53-206ENST00000420706 ASB2Q96Q27 587 aa12.79□□□□□ -0.36
TMEM53-206ENST00000420706 FEM1AQ9BSK4 669 aa12.79□□□□□ -0.36
TMEM53-206ENST00000420706 ACE2Q9BYF1 805 aaPredicted RBP12.79□□□□□ -0.36
TMEM53-206ENST00000420706 HOMER3Q9NSC5 361 aa12.79□□□□□ -0.36
TMEM53-206ENST00000420706 INTS6Q9UL03 887 aaKnown RBP12.79□□□□□ -0.36
TMEM53-206ENST00000420706 DNPEPQ9ULA0 475 aa12.79□□□□□ -0.36
TMEM53-206ENST00000420706 DRG1Q9Y295 367 aaKnown RBP12.79□□□□□ -0.36
TMEM53-206ENST00000420706 CHD5Q8TDI0 1954 aa12.79□□□□□ -0.36
TMEM53-206ENST00000420706 SPTBN5Q9NRC6 3674 aaKnown RBP12.79□□□□□ -0.36
TMEM53-206ENST00000420706 GOLGA6L10A0A0M3HER8 536 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 HACD1B0YJ81 288 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 H7C0C1 242 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 CCDC188H7C350 402 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 MCF2LO15068 1137 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 KDELR3O43731 214 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 LIASO43766 372 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 NARSO43776 548 aaKnown RBP12.78□□□□□ -0.36
TMEM53-206ENST00000420706 CCNCP24863 283 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 GARSP41250 739 aaKnown RBP12.78□□□□□ -0.36
TMEM53-206ENST00000420706 ATP5OP48047 213 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 DGKGP49619 791 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 PPIDQ08752 370 aaKnown RBP12.78□□□□□ -0.36
TMEM53-206ENST00000420706 SERINC3Q13530 473 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 SNX1Q13596 522 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 PLEKHG6Q3KR16 790 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 B4GALNT4Q76KP1 1039 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 CEP112Q8N8E3 955 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 DNASE1L2Q92874 299 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 MAGOHBQ96A72 148 aaKnown RBP12.78□□□□□ -0.36
TMEM53-206ENST00000420706 HDAC11Q96DB2 347 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 TSGA13Q96PP4 275 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 LGMNQ99538 433 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 SPON2Q9BUD6 331 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 BRD8Q9H0E9 1235 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 MUC3BQ9H195 1237 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 C10orf88Q9H8K7 445 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 SLC2A4RGQ9NR83 387 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 ABCB8Q9NUT2 735 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 DNAJC17Q9NVM6 304 aaKnown RBP12.78□□□□□ -0.36
TMEM53-206ENST00000420706 IPO11Q9UI26 975 aaKnown RBP12.78□□□□□ -0.36
TMEM53-206ENST00000420706 GGA2Q9UJY4 613 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 SLC27A6Q9Y2P4 619 aa12.78□□□□□ -0.36
TMEM53-206ENST00000420706 COL6A3P12111 3177 aa12.77□□□□□ -0.36
TMEM53-206ENST00000420706 NYNRINQ9P2P1 1898 aaKnown RBP12.77□□□□□ -0.37
TMEM53-206ENST00000420706 BCLAF3A2AJT9 711 aaKnown RBP12.77□□□□□ -0.37
TMEM53-206ENST00000420706 PPP1R12AO14974 1030 aaPredicted RBP12.77□□□□□ -0.37
TMEM53-206ENST00000420706 MAFKO60675 156 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 PHF2O75151 1096 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 ZMPSTE24O75844 475 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 SRFP11831 508 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 PABPC1P11940 636 aaKnown RBP12.77□□□□□ -0.37
TMEM53-206ENST00000420706 ETFBP38117 255 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 COILP38432 576 aaPredicted RBP12.77□□□□□ -0.37
TMEM53-206ENST00000420706 EIF2DP41214 584 aaKnown RBP12.77□□□□□ -0.37
TMEM53-206ENST00000420706 KCNJ1P48048 391 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 SOX9P48436 509 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 GALK1P51570 392 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 BYSLQ13895 437 aaKnown RBP12.77□□□□□ -0.37
TMEM53-206ENST00000420706 DMC1Q14565 340 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 OASLQ15646 514 aaKnown RBP12.77□□□□□ -0.37
TMEM53-206ENST00000420706 PITRM1Q5JRX3 1037 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 IL31Q6EBC2 164 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 GRAMD4Q6IC98 578 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 TTC27Q6P3X3 843 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 DARS2Q6PI48 645 aaKnown RBP12.77□□□□□ -0.37
TMEM53-206ENST00000420706 CCDC13Q8IYE1 715 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 PHTF2Q8N3S3 785 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 CCNYQ8ND76 341 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 ATL2Q8NHH9 583 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 TFB1MQ8WVM0 346 aaKnown RBP12.77□□□□□ -0.37
TMEM53-206ENST00000420706 NKD2Q969F2 451 aaPredicted RBP12.77□□□□□ -0.37
TMEM53-206ENST00000420706 CARD6Q9BX69 1037 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 DDX47Q9H0S4 455 aaKnown RBP12.77□□□□□ -0.37
TMEM53-206ENST00000420706 ATP13A1Q9HD20 1204 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 RBM12Q9NTZ6 932 aaKnown RBP12.77□□□□□ -0.37
TMEM53-206ENST00000420706 DEC1Q9P2X7 70 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 TICRRQ7Z2Z1 1910 aa12.77□□□□□ -0.37
TMEM53-206ENST00000420706 COL4A2P08572 1712 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 TCF20Q9UGU0 1960 aaKnown RBP12.76□□□□□ -0.37
TMEM53-206ENST00000420706 A0A0A0MRY4 1105 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 CTAGE15A4D2H0 777 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.76□□□□□ -0.37
TMEM53-206ENST00000420706 J3KR12 359 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 SNAP91O60641 907 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 CTAGE8P0CG41 777 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 VAV1P15498 845 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 GLDCP23378 1020 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms