RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 CCDC185Q8N715 623 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 SYN2Q92777 582 aaPredicted RBP20.87■□□□□ 0.93
GTF3A-202ENST00000419181 FOXJ1Q92949 421 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 NTAN1Q96AB6 310 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 IQCDQ96DY2 449 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 RTKNQ9BST9 563 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 ZYG11BQ9C0D3 744 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 MUC3BQ9H195 1237 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 OSBPL2Q9H1P3 480 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 PPARGC1AQ9UBK2 798 aaKnown RBP20.87■□□□□ 0.93
GTF3A-202ENST00000419181 OR12D3Q9UGF7 316 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 EVLQ9UI08 416 aaPredicted RBP20.87■□□□□ 0.93
GTF3A-202ENST00000419181 LNP1A1A4G5 178 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 KHNYNO15037 678 aaKnown RBP20.86■□□□□ 0.93
GTF3A-202ENST00000419181 DNTTP04053 509 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 SKILP12757 684 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 NNMTP40261 264 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 LIMK1P53667 647 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 MAMLD1Q13495 774 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 C6orf118Q5T5N4 469 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 HGSNATQ68CP4 663 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 PLEKHA7Q6IQ23 1121 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 DCUN1D2Q6PH85 259 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 LRSAM1Q6UWE0 723 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 CADM4Q8NFZ8 388 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 FRS2Q8WU20 508 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 PTPRN2Q92932 1015 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 PSMB7Q99436 277 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 CNPY3Q9BT09 278 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 GPR174Q9BXC1 333 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 SLC25A13Q9UJS0 675 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 CAPN11Q9UMQ6 739 aa20.86■□□□□ 0.93
GTF3A-202ENST00000419181 SLC30A4O14863 429 aa20.85■□□□□ 0.93
GTF3A-202ENST00000419181 OR1E1P30953 314 aa20.85■□□□□ 0.93
GTF3A-202ENST00000419181 ZBED6P86452 979 aa20.85■□□□□ 0.93
GTF3A-202ENST00000419181 SCAPQ12770 1279 aa20.85■□□□□ 0.93
GTF3A-202ENST00000419181 TTC31Q49AM3 519 aaPredicted RBP20.85■□□□□ 0.93
GTF3A-202ENST00000419181 DNAAF5Q86Y56 855 aa20.85■□□□□ 0.93
GTF3A-202ENST00000419181 FAM129BQ96TA1 746 aa20.85■□□□□ 0.93
GTF3A-202ENST00000419181 C2orf49Q9BVC5 232 aaPredicted RBP20.85■□□□□ 0.93
GTF3A-202ENST00000419181 XPO4Q9C0E2 1151 aaKnown RBP20.85■□□□□ 0.93
GTF3A-202ENST00000419181 TSPY26PQ9H489 355 aa20.85■□□□□ 0.93
GTF3A-202ENST00000419181 PARVAQ9NVD7 372 aa20.85■□□□□ 0.93
GTF3A-202ENST00000419181 SCML1Q9UN30 329 aa20.85■□□□□ 0.93
GTF3A-202ENST00000419181 NEU3Q9UQ49 428 aa20.85■□□□□ 0.93
GTF3A-202ENST00000419181 CHD5Q8TDI0 1954 aa20.85■□□□□ 0.93
GTF3A-202ENST00000419181 A0A0D9SEW6 157 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 DCDC2BA2VCK2 349 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 FAM72CH0Y354 149 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 ATMINO43313 823 aaPredicted RBP20.84■□□□□ 0.93
GTF3A-202ENST00000419181 ATP9BO43861 1147 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 RNASEH1O60930 286 aaKnown RBP20.84■□□□□ 0.93
GTF3A-202ENST00000419181 FTLP02792 175 aaPredicted RBP20.84■□□□□ 0.93
GTF3A-202ENST00000419181 GYPCP04921 128 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 VAV1P15498 845 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 IRX4P78413 519 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 OGDHQ02218 1023 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 ELAVL3Q14576 367 aaKnown RBP20.84■□□□□ 0.93
GTF3A-202ENST00000419181 CST6Q15828 149 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 TRIM61Q5EBN2 209 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 FAM72AQ5TYM5 149 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 FAM72DQ6L9T8 149 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 SLC23A3Q6PIS1 610 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 ZNF783Q6ZMS7 281 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 FAM124AQ86V42 546 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 FAM72BQ86X60 149 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 DCAF4L2Q8NA75 395 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 EDEM2Q9BV94 578 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 MAGEB5Q9BZ81 275 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 PCED1AQ9H1Q7 454 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 PABPC3Q9H361 631 aaKnown RBP20.84■□□□□ 0.93
GTF3A-202ENST00000419181 HS3ST2Q9Y278 367 aa20.84■□□□□ 0.93
GTF3A-202ENST00000419181 BZW2Q9Y6E2 419 aaKnown RBP20.84■□□□□ 0.93
GTF3A-202ENST00000419181 CACNA1EQ15878 2313 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 ILVBLA1L0T0 632 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 SNAP91O60641 907 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 RTN2O75298 545 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 LRIG2O94898 1065 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 TPM3P06753 285 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 PLEKP08567 350 aaPredicted RBP20.83■□□□□ 0.93
GTF3A-202ENST00000419181 ACSL1P33121 698 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 KRT83P78385 493 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 NFKBIBQ15653 356 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 TDRD12Q587J7 1177 aaKnown RBP20.83■□□□□ 0.93
GTF3A-202ENST00000419181 SYCP2LQ5T4T6 812 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 STPG1Q5TH74 334 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 USP30Q70CQ3 517 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 SLFN11Q7Z7L1 901 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 MMAAQ8IVH4 418 aaKnown RBP20.83■□□□□ 0.93
GTF3A-202ENST00000419181 STK40Q8N2I9 435 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 SH2D3CQ8N5H7 860 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 CEP76Q8TAP6 659 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 CPLX3Q8WVH0 158 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 ISCUQ9H1K1 167 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 RETREG1Q9H6L5 497 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 VPS51Q9UID3 782 aa20.83■□□□□ 0.93
GTF3A-202ENST00000419181 LUC7L2Q9Y383 392 aaKnown RBP20.83■□□□□ 0.93
GTF3A-202ENST00000419181 METTL12A8MUP2 240 aa20.82■□□□□ 0.92
GTF3A-202ENST00000419181 SERPING1P05155 500 aa20.82■□□□□ 0.92
GTF3A-202ENST00000419181 RHOQP17081 205 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms