RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 PDK2Q15119 407 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 SMTNL2Q2TAL5 461 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 C11orf63Q6NUN7 778 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 KIAA1328Q86T90 577 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 RASSF3Q86WH2 238 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 VSIG1Q86XK7 387 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 CYB5D2Q8WUJ1 264 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 TSC1Q92574 1164 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 PSMB7Q99436 277 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 C2orf49Q9BVC5 232 aaPredicted RBP17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 MUC3BQ9H195 1237 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 PCDH18Q9HCL0 1135 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 POLMQ9NP87 494 aaPredicted RBP17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 CACNA2D2Q9NY47 1150 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 SUN2Q9UH99 717 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 VPS28Q9UK41 221 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 TFR2Q9UP52 801 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 ALG6Q9Y672 507 aa17.97■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 A0A0D9SEW6 157 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 ZNF487B1APH4 448 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 WASH3PC4AMC7 463 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 H3BRJ5 948 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 BUB1BO60566 1050 aaPredicted RBP17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 RAMP2O60895 175 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 APBB3O95704 486 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 HOXB2P14652 356 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 GOT1P17174 413 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 IL4RP24394 825 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 ARL4AP40617 200 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 NDST2P52849 883 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 ST8SIA6P61647 398 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 CSTF1Q05048 431 aaKnown RBP17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 DPYSQ14117 519 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 PPP6R3Q5H9R7 873 aaPredicted RBP17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 SERPINA13PQ6UXR4 307 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 ZNF662Q6ZS27 426 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 CPNE8Q86YQ8 564 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 MAP7D3Q8IWC1 876 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 LZTR1Q8N653 840 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 TPCN2Q8NHX9 752 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 HSPH1Q92598 858 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 ARHGEF2Q92974 986 aaKnown RBP17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 ZDHHC4Q9NPG8 344 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 DNAI1Q9UI46 699 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 HS3ST2Q9Y278 367 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 DUSP10Q9Y6W6 482 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 CACNA1HO95180 2353 aa17.96■□□□□ 0.47
COMMD3-BMI1-201ENST00000417470 DAPK3O43293 454 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 ZMPSTE24O75844 475 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 ALDH1A2O94788 518 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 ERCC2P18074 760 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 COMTP21964 271 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 NNMTP40261 264 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 CTSOP43234 321 aaPredicted RBP17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 SSR1P43307 286 aaKnown RBP17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 CAMK2GQ13555 558 aaPredicted RBP17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 STARD3Q14849 445 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 IFI16Q16666 785 aaKnown RBP17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 PARP15Q460N3 678 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 ATP13A4Q4VNC1 1196 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 FNDC3BQ53EP0 1204 aaKnown RBP17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 AFMIDQ63HM1 303 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 WDR5BQ86VZ2 330 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 RHOT1Q8IXI2 618 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 RNF10Q8N5U6 811 aaKnown RBP17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 ZBTB44Q8NCP5 570 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 TSTD1Q8NFU3 115 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 UBE2Q2Q8WVN8 375 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 CSPG4P5Q96PW8 444 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 ZNF670Q9BS34 389 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 DESI2Q9BSY9 194 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 KLC2Q9H0B6 622 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 NOL6Q9H6R4 1146 aaKnown RBP17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 FBRSQ9HAH7 460 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 POLR3BQ9NW08 1133 aaPredicted RBP17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 ZSCAN32Q9NX65 697 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 VPS51Q9UID3 782 aa17.95■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 CHD5Q8TDI0 1954 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 TARSL2A2RTX5 802 aaKnown RBP17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 TMEM110-MUSTN1A8MSY1 372 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 DCLK1O15075 740 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 ATP9BO43861 1147 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 COL9A1P20849 921 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 PRKCHP24723 683 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 WASP42768 502 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 CLCN6P51797 869 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 CDH6P55285 790 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 POLD3Q15054 466 aaPredicted RBP17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 HNRNPA1L2Q32P51 320 aaKnown RBP17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 RETSATQ6NUM9 610 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 LONP2Q86WA8 852 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 KCTD6Q8NC69 237 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 OR7D4Q8NG98 312 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 FAF2Q96CS3 445 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 TSGA10Q9BZW7 698 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 LRRC19Q9H756 370 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 PRDM16Q9HAZ2 1276 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 ATP13A1Q9HD20 1204 aa17.94■□□□□ 0.46
COMMD3-BMI1-201ENST00000417470 DDX56Q9NY93 547 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms