RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 MPP6Q9NZW5 540 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 VPS28Q9UK41 221 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 NCKAP1Q9Y2A7 1128 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 GON4LQ3T8J9 2241 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 A0A1B0GTW7 788 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 A0A1W2PQC6 194 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 ARHGAP33O14559 1287 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 MID1O15344 667 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 SEMA4FO95754 770 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 SERPINC1P01008 464 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 SYPP08247 313 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 PTMSP20962 102 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 C1QBPQ07021 282 aaKnown RBP16.05■□□□□ 0.16
ITGB1-204ENST00000417122 SFSWAPQ12872 951 aaKnown RBP16.05■□□□□ 0.16
ITGB1-204ENST00000417122 CST6Q15828 149 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 ARL13BQ3SXY8 428 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 ACCSLQ4AC99 568 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 SH3PXD2AQ5TCZ1 1133 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 LRSAM1Q6UWE0 723 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 STRADAQ7RTN6 431 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 TFAP2DQ7Z6R9 452 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 STK40Q8N2I9 435 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 GANCQ8TET4 914 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 FRS2Q8WU20 508 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 FAM129BQ96TA1 746 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 FBXL12Q9NXK8 326 aa16.05■□□□□ 0.16
ITGB1-204ENST00000417122 EIF2B4Q9UI10 523 aaKnown RBP16.05■□□□□ 0.16
ITGB1-204ENST00000417122 LRRC53A6NM62 1247 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 SIGLEC16A6NMB1 481 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 ATP9BO43861 1147 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 KCNK5O95279 499 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 VAV1P15498 845 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 TNFAIP3P21580 790 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 GPD1P21695 349 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 OR1E1P30953 314 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 SLC8A1P32418 973 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 RFC1P35251 1148 aaPredicted RBP16.04■□□□□ 0.16
ITGB1-204ENST00000417122 TPM4P67936 248 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 KRT83P78385 493 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 ELAVL3Q14576 367 aaKnown RBP16.04■□□□□ 0.16
ITGB1-204ENST00000417122 NR1I3Q14994 352 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 ARTNQ5T4W7 220 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 C6orf118Q5T5N4 469 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 ACAD10Q6JQN1 1059 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 WDR59Q6PJI9 974 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 ZCCHC9Q8N567 271 aaKnown RBP16.04■□□□□ 0.16
ITGB1-204ENST00000417122 FAM172AQ8WUF8 416 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 SNX19Q92543 992 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 CENPIQ92674 756 aaPredicted RBP16.04■□□□□ 0.16
ITGB1-204ENST00000417122 PSMB7Q99436 277 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 OMDQ99983 421 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 ZYG11BQ9C0D3 744 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 CBX8Q9HC52 389 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 SERGEFQ9UGK8 458 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 NUMA1Q14980 2115 aa16.04■□□□□ 0.16
ITGB1-204ENST00000417122 A0A1W2PP55 124 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 TCRBV5S1A1TA0A578 114 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 BCAT2O15382 392 aaPredicted RBP16.03■□□□□ 0.16
ITGB1-204ENST00000417122 RNASEH2AO75792 299 aaKnown RBP16.03■□□□□ 0.16
ITGB1-204ENST00000417122 ADH1BP00325 375 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 ADRB1P08588 477 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 C5AR1P21730 350 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 ADRA1BP35368 520 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 PSMD8P48556 350 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 HDAC4P56524 1084 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 DLG2Q15700 870 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 ASIC2Q16515 512 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 DNAJC24Q6P3W2 148 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 LUZP1Q86V48 1076 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 MCOLN2Q8IZK6 566 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 SH2D3CQ8N5H7 860 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 MINDY1Q8N5J2 469 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 SYT11Q9BT88 431 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 C2orf49Q9BVC5 232 aaPredicted RBP16.03■□□□□ 0.16
ITGB1-204ENST00000417122 NEUROG2Q9H2A3 272 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 PPARGC1AQ9UBK2 798 aaKnown RBP16.03■□□□□ 0.16
ITGB1-204ENST00000417122 OR12D3Q9UGF7 316 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.03■□□□□ 0.16
ITGB1-204ENST00000417122 LAMA1P25391 3075 aa16.03■□□□□ 0.16
ITGB1-204ENST00000417122 A0A0D9SEW6 157 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 ILVBLA1L0T0 632 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 ANKRD62A6NC57 917 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 SNAP91O60641 907 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 OPHN1O60890 802 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 FSBPO95073 299 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 IL1BP01584 269 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 SRCP12931 536 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 NOVA1P51513 510 aaKnown RBP16.02■□□□□ 0.16
ITGB1-204ENST00000417122 NRG1Q02297 640 aaPredicted RBP16.02■□□□□ 0.16
ITGB1-204ENST00000417122 SFMBT2Q5VUG0 894 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 PSAPL1Q6NUJ1 521 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 PPP1R2P3Q6NXS1 205 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 HDDC3Q8N4P3 179 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 AADATQ8N5Z0 425 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 CCDC185Q8N715 623 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 DCAF4L2Q8NA75 395 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 C1orf216Q8TAB5 229 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 OR8D1Q8WZ84 308 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 BIRC7Q96CA5 298 aa16.02■□□□□ 0.16
ITGB1-204ENST00000417122 MCEEQ96PE7 176 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms