RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 TNNC2P02585 160 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 THEGLP0DJG4 465 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 SLC5A2P31639 672 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 SLC8A1P32418 973 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 HOXD13P35453 343 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 DRD3P35462 400 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 PSMD8P48556 350 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 CASP4P49662 377 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 DUSP3P51452 185 aaPredicted RBP8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 CCR5P51681 352 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 ZBTB16Q05516 673 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 GNL2Q13823 731 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 EIF4HQ15056 248 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 CDKN3Q16667 212 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 TTC31Q49AM3 519 aaPredicted RBP8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 C9orf64Q5T6V5 341 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 IGF2-ASQ6U949 168 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 CLEC20AQ6ZU45 233 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 USP30Q70CQ3 517 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 B3GNT8Q7Z7M8 397 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 ZNF295-AS1Q8N0V1 137 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 GPD1LQ8N335 351 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 MFSD2AQ8NA29 543 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 PLEKHO2Q8TD55 490 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 SMARCD1Q96GM5 515 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 LMLNQ96KR4 655 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 ACCSQ96QU6 501 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 TWNKQ96RR1 684 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 SEMA3CQ99985 751 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 SLC25A18Q9H1K4 315 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 LRRC4CQ9HCJ2 640 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 CSNK1G1Q9HCP0 422 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 SEPT3Q9UH03 358 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 GGA2Q9UJY4 613 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 NAGPAQ9UK23 515 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 SCML2Q9UQR0 700 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 NCKAP1Q9Y2A7 1128 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 KIF3AQ9Y496 699 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 PCDHGC4Q9Y5F7 938 aa8.99□□□□□ -0.97
NIF3L1-206ENST00000416651 CELSR2Q9HCU4 2923 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 TBC1D3DA0A087WVF3 549 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 TBC1D3IA0A087WXS9 549 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 TBC1D3EA0A087X179 549 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 TBC1D3KA0A087X1G2 549 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 SLC12A8A0AV02 714 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 A1L4Q6 167 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 TBC1D3FA6NER0 549 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 LRRC72A6NJI9 287 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 TMEM229AB2RXF0 380 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 TBC1D3LB9A6J9 549 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 K7ESM1 405 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 LATO43561 262 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 PIAS2O75928 621 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 GCNT3O95395 438 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 TBC1D3HP0C7X1 549 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 DLATP10515 647 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 PABPC1P11940 636 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 GARTP22102 1010 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 UQCRFS1P47985 274 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 TNNC1P63316 161 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 DUOXA2Q1HG44 320 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 TBC1D3GQ6DHY5 549 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 TBC1D3CQ6IPX1 549 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 NAPEPLDQ6IQ20 393 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 RFWD3Q6PCD5 774 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 CHSY3Q70JA7 882 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 EFL1Q7Z2Z2 1120 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 ZFAND4Q86XD8 727 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 FAM217AQ8IXS0 508 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 TBC1D3Q8IZP1 549 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 STK40Q8N2I9 435 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 DNAJC19Q96DA6 116 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 LIN37Q96GY3 246 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 OMDQ99983 421 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 ZCCHC2Q9C0B9 1178 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 ABCG4Q9H172 646 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 MRPL44Q9H9J2 332 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 TJP2Q9UDY2 1190 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 SLCO3A1Q9UIG8 710 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 PLA2G4CQ9UP65 541 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 DAAM1Q9Y4D1 1078 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 LRRK1Q38SD2 2015 aa8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 NYNRINQ9P2P1 1898 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-206ENST00000416651 RNF103O00237 685 aa8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 CDK2AP1O14519 115 aa8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 TIMM44O43615 452 aa8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 LZTS3O60299 673 aaPredicted RBP8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 PPFIA2O75334 1257 aa8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 GJB6O95452 261 aa8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 DLDP09622 509 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 PRLRP16471 622 aa8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 GJB2P29033 226 aa8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 CHKAP35790 457 aa8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 CLDN2P57739 230 aa8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 GOLGA8FQ08AF8 430 aa8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 GOLGA8DPQ0D2H9 430 aa8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 SGO2Q562F6 1265 aa8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 TPRG1LQ5T0D9 272 aa8.97□□□□□ -0.97
NIF3L1-206ENST00000416651 LCE3BQ5TA77 95 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms