RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CBFA2T3O75081 653 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 IL1BP01584 269 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 GGCXP38435 758 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 NUMBP49757 651 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 IRAK1P51617 712 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 CCR5P51681 352 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 RACK1P63244 317 aaKnown RBP18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 ACCSLQ4AC99 568 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 LRRC31Q6UY01 552 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 GLRX5Q86SX6 157 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 NOP9Q86U38 636 aaKnown RBP18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 AADATQ8N5Z0 425 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 OR52K2Q8NGK3 314 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 OR8D1Q8WZ84 308 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 SKA1Q96BD8 255 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 C1orf74Q96LT6 269 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 TBCBQ99426 244 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 TMEM121BQ9BXQ6 578 aaPredicted RBP18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 MSRB2Q9Y3D2 182 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 DAAM1Q9Y4D1 1078 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 OR51B4Q9Y5P0 310 aa18.08■□□□□ 0.48
PDLIM2-208ENST00000416159 TMEM8BA6NDV4 472 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 FLRT2O43155 660 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 MMEP08473 750 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 FTH1P19P0C7X4 201 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 VAV1P15498 845 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 TFE3P19532 575 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 C21orf59P57076 290 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 NOMO3P69849 1222 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 KRT83P78385 493 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 KRT31Q15323 416 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 DLG2Q15700 870 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 FKBP15Q5T1M5 1219 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 CDKAL1Q5VV42 579 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 FAM46CQ5VWP2 391 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 RBM43Q6ZSC3 357 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 ARCQ7LC44 396 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 RAB44Q7Z6P3 723 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 CHCHD4Q8N4Q1 142 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 KDF1Q8NAX2 398 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 OR14C36Q8NHC7 312 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 EPS8L1Q8TE68 723 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 CPA5Q8WXQ8 436 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 GATA6Q92908 595 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 GBP4Q96PP9 640 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 ACE2Q9BYF1 805 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 MUC3BQ9H195 1237 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 GANQ9H2C0 597 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 ANLNQ9NQW6 1124 aa18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 APOBEC2Q9Y235 224 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-208ENST00000416159 FAM221BA6H8Z2 402 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 DRGXA6NNA5 263 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 C10orf142B7Z368 130 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 GOLGA8SH3BPF8 625 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 VILLO15195 856 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 ALOX15BO15296 676 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 DFNA5O60443 496 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 CNTN5O94779 1100 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 RHOCP08134 193 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 FLT3P36888 993 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 CTSKP43235 329 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 NAA35Q5VZE5 725 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 SETD3Q86TU7 594 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 ZNF683Q8IZ20 524 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 SH2D3CQ8N5H7 860 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 RHBDD1Q8TEB9 315 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 ADAMTS14Q8WXS8 1223 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 CDC6Q99741 560 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 KDM4CQ9H3R0 1056 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 TMEM59LQ9UK28 342 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 KLK13Q9UKR3 277 aa18.06■□□□□ 0.48
PDLIM2-208ENST00000416159 NYNRINQ9P2P1 1898 aaKnown RBP18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 C1QTNF3-AMACRE9PGA6 284 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 MCF2LO15068 1137 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 SLC7A4O43246 635 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 GFPT2O94808 682 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 ZNF18P17022 549 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 DRD3P35462 400 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 SOX5P35711 763 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 CCT8P50990 548 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 ADPRHP54922 357 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 POLR2FP61218 127 aaKnown RBP18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 CDR2Q01850 454 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 ALFQ53S48 1182 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 C2CD6Q53TS8 623 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 LAYNQ6UX15 382 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 ANKRD20A12PQ8NF67 263 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 BAHD1Q8TBE0 780 aaPredicted RBP18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 GPT2Q8TD30 523 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 FAM131CQ96AQ9 280 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 SLC6A18Q96N87 628 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 HAPLN3Q96S86 360 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 C2orf49Q9BVC5 232 aaPredicted RBP18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 EBF2Q9HAK2 575 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 ANO10Q9NW15 660 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 NOCTQ9UK39 431 aaKnown RBP18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 HS3ST2Q9Y278 367 aa18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 FARP1Q9Y4F1 1045 aaPredicted RBP18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 TMEM131Q92545 1883 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms