RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 WBP2Q969T9 261 aa14.6□□□□□ -0.07
HMGA1P1-201ENST00000415560 EXOC4Q96A65 974 aa14.6□□□□□ -0.07
HMGA1P1-201ENST00000415560 PRO3102Q9H379 93 aa14.6□□□□□ -0.07
HMGA1P1-201ENST00000415560 SP110Q9HB58 689 aa14.6□□□□□ -0.07
HMGA1P1-201ENST00000415560 RAB6BQ9NRW1 208 aa14.6□□□□□ -0.07
HMGA1P1-201ENST00000415560 NDFIP2Q9NV92 336 aa14.6□□□□□ -0.07
HMGA1P1-201ENST00000415560 GOLGA6AQ9NYA3 693 aa14.6□□□□□ -0.07
HMGA1P1-201ENST00000415560 IPO11Q9UI26 975 aaKnown RBP14.6□□□□□ -0.07
HMGA1P1-201ENST00000415560 HPCAL4Q9UM19 191 aa14.6□□□□□ -0.07
HMGA1P1-201ENST00000415560 SHOC2Q9UQ13 582 aa14.6□□□□□ -0.07
HMGA1P1-201ENST00000415560 SHROOM3Q8TF72 1996 aa14.6□□□□□ -0.07
HMGA1P1-201ENST00000415560 TRDMT1O14717 391 aaKnown RBP14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 GREM1O60565 184 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 MAFKO60675 156 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 CCNB1P14635 433 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 VAV1P15498 845 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 PTPN3P26045 913 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 ECHS1P30084 290 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 ZXDBP98169 803 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 MLLT1Q03111 559 aaPredicted RBP14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 GNA12Q03113 381 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 DHX9Q08211 1270 aaKnown RBP14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 IL10RBQ08334 325 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 SPDYCQ5MJ68 293 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 ARTNQ5T4W7 220 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 RNASEH2BQ5TBB1 312 aaKnown RBP14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 ARID3BQ8IVW6 561 aaPredicted RBP14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 TP53INP2Q8IXH6 220 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 BBS5Q8N3I7 341 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 CARNMT1Q8N4J0 409 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 ZNF557Q8N988 423 aaPredicted RBP14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 TDRD5Q8NAT2 981 aaKnown RBP14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 NETO2Q8NC67 525 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 LRRN4Q8WUT4 740 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 USP13Q92995 863 aaPredicted RBP14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 NEUROG2Q9H2A3 272 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 NOTCH4Q99466 2003 aa14.59□□□□□ -0.07
HMGA1P1-201ENST00000415560 KCNK1O00180 336 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 JCHAINP01591 159 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 FAM153BP0C7A2 387 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 CEBPBP17676 345 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 ARL4CP56559 192 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 RPS24P62847 133 aaKnown RBP14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 IFI35P80217 286 aaPredicted RBP14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 RBM10P98175 930 aaKnown RBP14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 CDK16Q00536 496 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 WASHC5Q12768 1159 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 SERINC3Q13530 473 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 HNRNPDQ14103 355 aaKnown RBP14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 FAM153CQ494X1 144 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 TMCO4Q5TGY1 634 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 MARC1Q5VT66 337 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 IL31Q6EBC2 164 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 RHBDF2Q6PJF5 856 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 CENPUQ71F23 418 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 MTERF4Q7Z6M4 381 aaKnown RBP14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 CIR1Q86X95 450 aaPredicted RBP14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 BBS7Q8IWZ6 715 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 ZNF567Q8N184 647 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 MREGQ8N565 214 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 ZCCHC9Q8N567 271 aaKnown RBP14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 ZSCAN18Q8TBC5 510 aaPredicted RBP14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 ING5Q8WYH8 240 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 CPT1BQ92523 772 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 ARHGEF2Q92974 986 aaKnown RBP14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 HMCESQ96FZ2 354 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 TEKT5Q96M29 485 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 ZNF599Q96NL3 588 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 ADAM7Q9H2U9 754 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 ETNK1Q9HBU6 452 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 GDE1Q9NZC3 331 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 IGSF9Q9P2J2 1179 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 ZNF212Q9UDV6 495 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 FAM153AQ9UHL3 310 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 RSPH14Q9UHP6 348 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 TBC1D30Q9Y2I9 924 aa14.58□□□□□ -0.08
HMGA1P1-201ENST00000415560 NUP210Q8TEM1 1887 aaPredicted RBP14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 ERI2A8K979 691 aaKnown RBP14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 EIF3HO15372 352 aaKnown RBP eCLIP14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 LUC7L3O95232 432 aaKnown RBP14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 TPSB2P20231 275 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 HSPA9P38646 679 aaKnown RBP14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 IRAK1P51617 712 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 PMS2P54278 862 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 GPS2Q13227 327 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 CDH18Q13634 790 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 CBX2Q14781 532 aaPredicted RBP14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 CASP8Q14790 479 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 TPSAB1Q15661 275 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 KCTD19Q17RG1 926 aaPredicted RBP14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 CFAP58Q5T655 872 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 CCDC25Q86WR0 208 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 PDIK1LQ8N165 341 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 TAB3Q8N5C8 712 aaPredicted RBP14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 NAT8LQ8N9F0 302 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 ITFG1Q8TB96 612 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 DEPDC1BQ8WUY9 529 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 E2F7Q96AV8 911 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 RIPOR3Q96MK2 946 aa14.57□□□□□ -0.08
HMGA1P1-201ENST00000415560 PRICKLE1Q96MT3 831 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms