RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 LMAN2Q12907 356 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 NR1H3Q13133 447 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 TDGQ13569 410 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 DMC1Q14565 340 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 PRKD1Q15139 912 aaPredicted RBP13.61□□□□□ -0.23
CNN3-203ENST00000415017 C12orf40Q86WS4 652 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 MFN1Q8IWA4 741 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 TTC16Q8NEE8 873 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 SPATA4Q8NEY3 305 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 SLCO2A1Q92959 643 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 CAPZA3Q96KX2 299 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 ASB2Q96Q27 587 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 BRD9Q9H8M2 597 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 PDFQ9HBH1 243 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 USP29Q9HBJ7 922 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 PLK2Q9NYY3 685 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 KIAA1522Q9P206 1035 aaPredicted RBP13.61□□□□□ -0.23
CNN3-203ENST00000415017 MYO18AQ92614 2054 aaKnown RBP13.6□□□□□ -0.23
CNN3-203ENST00000415017 BCLAF3A2AJT9 711 aaKnown RBP13.6□□□□□ -0.23
CNN3-203ENST00000415017 BDP1A6H8Y1 2624 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 HACD1B0YJ81 288 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 H0Y626 953 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 KRIT1O00522 736 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 KDELR3O43731 214 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 RAMP2O60895 175 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 PHF2O75151 1096 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 TULP3O75386 442 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 CD160O95971 181 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 ITGAVP06756 1048 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 ASGR2P07307 311 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 RHOCP08134 193 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 SRFP11831 508 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 MX2P20592 715 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 CCNCP24863 283 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 MZF1P28698 734 aaPredicted RBP13.6□□□□□ -0.23
CNN3-203ENST00000415017 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
CNN3-203ENST00000415017 CD70P32970 193 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 ETFBP38117 255 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 PAFAH1B1P43034 410 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 PAPOLAP51003 745 aaKnown RBP13.6□□□□□ -0.23
CNN3-203ENST00000415017 MESP2Q0VG99 397 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 POLD3Q15054 466 aaPredicted RBP13.6□□□□□ -0.23
CNN3-203ENST00000415017 PDK1Q15118 436 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 ANO4Q32M45 955 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 PLEKHG6Q3KR16 790 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 TMEM215Q68D42 235 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 TTC27Q6P3X3 843 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 C1orf228Q6PIY5 440 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 ADIPOR2Q86V24 386 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 CARNMT1Q8N4J0 409 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 MAML1Q92585 1016 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 TTC17Q96AE7 1141 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 RTP4Q96DX8 246 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 HMCESQ96FZ2 354 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 CELF6Q96J87 481 aaKnown RBP13.6□□□□□ -0.23
CNN3-203ENST00000415017 QKIQ96PU8 341 aaKnown RBP eCLIP13.6□□□□□ -0.23
CNN3-203ENST00000415017 XPO6Q96QU8 1125 aaKnown RBP13.6□□□□□ -0.23
CNN3-203ENST00000415017 PCYOX1Q9UHG3 505 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 DNPEPQ9ULA0 475 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 DUSP12Q9UNI6 340 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 NEU2Q9Y3R4 380 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 HEY1Q9Y5J3 304 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 NCOR1O75376 2440 aa13.6□□□□□ -0.23
CNN3-203ENST00000415017 ARHGAP42A6NI28 874 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 PRAMEF11O60813 436 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 ZNF189O75820 626 aaPredicted RBP13.59□□□□□ -0.23
CNN3-203ENST00000415017 RBP3P10745 1247 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 ACVRL1P37023 503 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 CSKP41240 450 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 SLC6A11P48066 632 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 FNTAP49354 379 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 CKAP4Q07065 602 aaKnown RBP13.59□□□□□ -0.23
CNN3-203ENST00000415017 IL10RBQ08334 325 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 CDH18Q13634 790 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 BYSLQ13895 437 aaKnown RBP13.59□□□□□ -0.23
CNN3-203ENST00000415017 SLC45A4Q5BKX6 768 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 CCDC181Q5TID7 509 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 RNF219Q5W0B1 726 aaPredicted RBP13.59□□□□□ -0.23
CNN3-203ENST00000415017 ARHGAP36Q6ZRI8 547 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 ADAT2Q7Z6V5 191 aaKnown RBP13.59□□□□□ -0.23
CNN3-203ENST00000415017 APCDD1Q8J025 514 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 TEX26Q8N6G2 289 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 DCAF4L2Q8NA75 395 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 OR7D4Q8NG98 312 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 C1orf54Q8WWF1 131 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 ATG4AQ8WYN0 398 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 ACDQ96AP0 544 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 ZNF599Q96NL3 588 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 AP1M1Q9BXS5 423 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 RBM12Q9NTZ6 932 aaKnown RBP13.59□□□□□ -0.23
CNN3-203ENST00000415017 GGA2Q9UJY4 613 aa13.59□□□□□ -0.23
CNN3-203ENST00000415017 TRIM24O15164 1050 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 MATN3O15232 486 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 NARSO43776 548 aaKnown RBP13.58□□□□□ -0.24
CNN3-203ENST00000415017 PABPC1P11940 636 aaKnown RBP13.58□□□□□ -0.24
CNN3-203ENST00000415017 CHRNA3P32297 505 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 COILP38432 576 aaPredicted RBP13.58□□□□□ -0.24
CNN3-203ENST00000415017 PTGIRP43119 386 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 DGKGP49619 791 aa13.58□□□□□ -0.24
CNN3-203ENST00000415017 EIF3EP60228 445 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms