RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 NLRP14Q86W24 1093 aa10.34□□□□□ -0.75
TMEM248-202ENST00000413593 CACUL1Q86Y37 369 aa10.34□□□□□ -0.75
TMEM248-202ENST00000413593 PYROXD2Q8N2H3 581 aa10.34□□□□□ -0.75
TMEM248-202ENST00000413593 DCAF4L2Q8NA75 395 aa10.34□□□□□ -0.75
TMEM248-202ENST00000413593 PRCCQ92733 491 aaPredicted RBP10.34□□□□□ -0.75
TMEM248-202ENST00000413593 TBC1D31Q96DN5 1066 aa10.34□□□□□ -0.75
TMEM248-202ENST00000413593 PSMB7Q99436 277 aa10.34□□□□□ -0.75
TMEM248-202ENST00000413593 C2orf49Q9BVC5 232 aaPredicted RBP10.34□□□□□ -0.75
TMEM248-202ENST00000413593 RETREG1Q9H6L5 497 aa10.34□□□□□ -0.75
TMEM248-202ENST00000413593 PARD6AQ9NPB6 346 aa10.34□□□□□ -0.75
TMEM248-202ENST00000413593 ITM2CQ9NQX7 267 aa10.34□□□□□ -0.75
TMEM248-202ENST00000413593 ZNHIT6Q9NWK9 470 aaKnown RBP10.34□□□□□ -0.75
TMEM248-202ENST00000413593 USP36Q9P275 1121 aaKnown RBP10.34□□□□□ -0.75
TMEM248-202ENST00000413593 CYP8B1Q9UNU6 501 aa10.34□□□□□ -0.75
TMEM248-202ENST00000413593 PCDHGA5Q9Y5G8 931 aa10.34□□□□□ -0.75
TMEM248-202ENST00000413593 MUC22E2RYF6 1773 aaPredicted RBP10.34□□□□□ -0.75
TMEM248-202ENST00000413593 ZNF292O60281 2723 aa10.34□□□□□ -0.75
TMEM248-202ENST00000413593 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 EDDM13A0A1B0GTR0 161 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 ILVBLA1L0T0 632 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 TARSL2A2RTX5 802 aaKnown RBP10.33□□□□□ -0.76
TMEM248-202ENST00000413593 AKR1B15C9JRZ8 316 aaPredicted RBP10.33□□□□□ -0.76
TMEM248-202ENST00000413593 SNAP91O60641 907 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 LRP3O75074 770 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 SIN3BO75182 1162 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 LRCH4O75427 683 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 RNF8O76064 485 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 IGLV3-19P01714 112 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 CYP1A2P05177 515 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 NNMTP40261 264 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 MAPKAPK2P49137 400 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 TPMTP51580 245 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 GALCP54803 685 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 RPS14P62263 151 aaKnown RBP10.33□□□□□ -0.76
TMEM248-202ENST00000413593 KRT83P78385 493 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 GNA12Q03113 381 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 GFPT1Q06210 699 aaPredicted RBP10.33□□□□□ -0.76
TMEM248-202ENST00000413593 SPEM2Q0P670 501 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 SEMA3BQ13214 749 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 SLC18A3Q16572 532 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 TSR1Q2NL82 804 aaKnown RBP10.33□□□□□ -0.76
TMEM248-202ENST00000413593 C9orf64Q5T6V5 341 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 SLC36A4Q6YBV0 504 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 LPCAT2Q7L5N7 544 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 CNGA4Q8IV77 575 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 TMEFF1Q8IYR6 380 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 KIAA2013Q8IYS2 634 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 GPR161Q8N6U8 529 aaKnown RBP10.33□□□□□ -0.76
TMEM248-202ENST00000413593 OR7D4Q8NG98 312 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 FRS2Q8WU20 508 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 ARHGEF26Q96DR7 871 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 PEBP4Q96S96 227 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 RSPH9Q9H1X1 276 aaPredicted RBP10.33□□□□□ -0.76
TMEM248-202ENST00000413593 ARRDC1-AS1Q9H2J1 176 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 SEMA4GQ9NTN9 838 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 NDFIP2Q9NV92 336 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 TMEM248Q9NWD8 314 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 GPATCH2LQ9NWQ4 482 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 VPS51Q9UID3 782 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 SLC25A13Q9UJS0 675 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 HS3ST2Q9Y278 367 aa10.33□□□□□ -0.76
TMEM248-202ENST00000413593 MYO18AQ92614 2054 aaKnown RBP10.32□□□□□ -0.76
TMEM248-202ENST00000413593 BCLAF3A2AJT9 711 aaKnown RBP10.32□□□□□ -0.76
TMEM248-202ENST00000413593 ATP9BO43861 1147 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 CREB3O43889 395 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 AKR1B10O60218 316 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 PRPSAP2O60256 369 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 ZMPSTE24O75844 475 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 MT-CO1P00395 513 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 ACADMP11310 421 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 VAV1P15498 845 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 EPHB2P29323 1055 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 CD6P30203 668 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 MIPP30301 263 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 PCK1P35558 622 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 MPLP40238 635 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 PTGER3P43115 390 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 DHPSP49366 369 aaPredicted RBP10.32□□□□□ -0.76
TMEM248-202ENST00000413593 ZNF75DP51815 510 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 RPL6Q02878 288 aaKnown RBP10.32□□□□□ -0.76
TMEM248-202ENST00000413593 CREB5Q02930 508 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 ZBTB16Q05516 673 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 ACAP1Q15027 740 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 DLG2Q15700 870 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 CSRP2Q16527 193 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 CA9Q16790 459 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 SPDYCQ5MJ68 293 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 ZNF776Q68DI1 518 aaPredicted RBP10.32□□□□□ -0.76
TMEM248-202ENST00000413593 CYP4V2Q6ZWL3 525 aaPredicted RBP10.32□□□□□ -0.76
TMEM248-202ENST00000413593 SH2D3CQ8N5H7 860 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 RTL3Q8N8U3 475 aaKnown RBP10.32□□□□□ -0.76
TMEM248-202ENST00000413593 PTPRN2Q92932 1015 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 MRFAP1L1Q96HT8 127 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 CHP1Q99653 195 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 EPAS1Q99814 870 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 NCAPGQ9BPX3 1015 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 SPON2Q9BUD6 331 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 SNRNP25Q9BV90 132 aaKnown RBP10.32□□□□□ -0.76
TMEM248-202ENST00000413593 NUP85Q9BW27 656 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 PACSIN1Q9BY11 444 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms