RNA–Protein interactions for RNA: ENST00000412148.5

CCDC88A-203, Transcript of coiled-coil domain containing 88A, humanhuman

TSL 1 (best)

Gene CCDC88A, Length 2,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88A-203ENST00000412148 KITP10721 976 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 ZNF23P17027 643 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 PIK3R1P27986 724 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 TYK2P29597 1187 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 GRM5P41594 1212 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 RPL14P50914 215 aaKnown RBP5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 DNAJB13P59910 316 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 GBE1Q04446 702 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 CAMK2BQ13554 666 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 LIPMQ5VYY2 423 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 LPCAT4Q643R3 524 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 EEF1DP3Q658K8 133 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 C16orf46Q6P387 395 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 ZCCHC23Q6ZST2 131 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 TTC30AQ86WT1 665 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 HPS6Q86YV9 775 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 CHERPQ8IWX8 916 aaKnown RBP5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 COLGALT1Q8NBJ5 622 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 MIPOL1Q8TD10 442 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 NTAN1Q96AB6 310 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 ASB9Q96DX5 294 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 FAR2Q96K12 515 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 CATSPER2Q96P56 530 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 PPP1R2P1Q96PQ5 205 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 KCTD15Q96SI1 283 aaPredicted RBP5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 CYP2S1Q96SQ9 504 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 GPR22Q99680 433 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 DDX50Q9BQ39 737 aaKnown RBP5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 HAUS8Q9BT25 410 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 OSBPL11Q9BXB4 747 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 C1QTNF1Q9BXJ1 281 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 PICK1Q9NRD5 415 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 GGA3Q9NZ52 723 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 MARCOQ9UEW3 520 aaPredicted RBP5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 TRHDEQ9UKU6 1024 aa5.86□□□□□ -1.47
CCDC88A-203ENST00000412148 MIA3Q5JRA6 1907 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 ZCWPW2A0A1B0GU75 182 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 WDR27A2RRH5 827 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 SOWAHBA6NEL2 793 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 EIF4E1BA6NMX2 242 aaKnown RBP5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 MEI4A8MW99 385 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 C9IYK1 514 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 DAB1O75553 588 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 GABBR2O75899 941 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 C22orf31O95567 290 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 FAM58BPP0C7Q3 252 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 IMPDH2P12268 514 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 ME2P23368 584 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 ARL4AP40617 200 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 ATP4BP51164 291 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 BCAT1P54687 386 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 GJA9P57773 515 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 MYBPC1Q00872 1141 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 BST2Q10589 180 aaKnown RBP5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 CNGA3Q16281 694 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 PSMD5Q16401 504 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 GOLGA7BQ2TAP0 167 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 DCAF4L1Q3SXM0 396 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 SLC25A52Q3SY17 297 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 PMF1Q6P1K2 205 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 C8orf82Q6P1X6 216 aaPredicted RBP5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 MAMDC4Q6UXC1 1216 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 DPH6Q7L8W6 267 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 GALNT7Q86SF2 657 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 SATL1Q86VE3 508 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 APOBEC3FQ8IUX4 373 aaKnown RBP5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 ERI1Q8IV48 349 aaKnown RBP5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 COLGALT2Q8IYK4 626 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 DSELQ8IZU8 1212 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 NUP93Q8N1F7 819 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 PELI3Q8N2H9 469 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 PHTF2Q8N3S3 785 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 ANKRD52Q8NB46 1076 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 STYXQ8WUJ0 223 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 PTCD2Q8WV60 388 aaKnown RBP5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 KCTD13Q8WZ19 329 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 DPF3Q92784 378 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 PIWIL1Q96J94 861 aaKnown RBP5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 UCN2Q96RP3 112 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 FTHL17Q9BXU8 183 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 EFCAB1Q9HAE3 211 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 DPP3Q9NY33 737 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 HSFX1Q9UBD0 423 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 LZTS1Q9Y250 596 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 DNAJC25-GNG10A0A024R161 153 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 TRIM64BA6NI03 449 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 TRPC5OSA6NMA1 111 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 MYL3P08590 195 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 ADORA2AP29274 412 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 MATKP42679 507 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 HPCAP84074 193 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 PPIDQ08752 370 aaKnown RBP5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 SEMA3BQ13214 749 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 CYLC2Q14093 348 aaPredicted RBP5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 MAPRE2Q15555 327 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 MDH1BQ5I0G3 518 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 SEL1L3Q68CR1 1132 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 KLHDC10Q6PID8 442 aa5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 PDZD4Q76G19 769 aaPredicted RBP5.85□□□□□ -1.47
CCDC88A-203ENST00000412148 TRMT1LQ7Z2T5 733 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms