RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PODXLO00592 558 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 IPO8O15397 1037 aaKnown RBP4.93□□□□□ -1.62
CLK1-203ENST00000409769 VIPP01282 170 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 C4AP0C0L4 1744 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 SETSIPP0DME0 302 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 CYP19A1P11511 503 aaPredicted RBP4.93□□□□□ -1.62
CLK1-203ENST00000409769 ATP5F1P24539 256 aaPredicted RBP4.93□□□□□ -1.62
CLK1-203ENST00000409769 PPM1AP35813 382 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 TXNL4AP83876 142 aaKnown RBP4.93□□□□□ -1.62
CLK1-203ENST00000409769 ITPK1Q13572 414 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 MORC3Q14149 939 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 RAB30Q15771 203 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 Q4G0T1 1027 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 FBXO38Q6PIJ6 1188 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 NSMCE1Q8WV22 266 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 WASF1Q92558 559 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 API5Q9BZZ5 524 aaKnown RBP4.93□□□□□ -1.62
CLK1-203ENST00000409769 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.93□□□□□ -1.623e-11■□□□□ 10.1
CLK1-203ENST00000409769 EBF3Q9H4W6 596 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 VPS45Q9NRW7 570 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 ATP10DQ9P241 1426 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 PI4KBQ9UBF8 816 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 DBF4Q9UBU7 674 aaPredicted RBP4.93□□□□□ -1.62
CLK1-203ENST00000409769 LPAR3Q9UBY5 353 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 PCDHGB2Q9Y5G2 931 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 SCN7AQ01118 1682 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 QSER1Q2KHR3 1735 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 GXYLT2A0PJZ3 443 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 FAM90A10PA6NDY2 464 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 GOLGA6L3A6NEY3 463 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 OAZ2O95190 189 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 MBPP02686 304 aaPredicted RBP4.92□□□□□ -1.62
CLK1-203ENST00000409769 TMIGD3P0DMS9 266 aaPredicted RBP4.92□□□□□ -1.62
CLK1-203ENST00000409769 PECAM1P16284 738 aaPredicted RBP4.92□□□□□ -1.62
CLK1-203ENST00000409769 ABCB4P21439 1286 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 MMP8P22894 467 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 SERPINB3P29508 390 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 PBX1P40424 430 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 TECP42680 631 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 COPB1P53618 953 aaKnown RBP4.92□□□□□ -1.62
CLK1-203ENST00000409769 IRX6P78412 446 aaPredicted RBP4.92□□□□□ -1.62
CLK1-203ENST00000409769 CCDC15Q0P6D6 951 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 ZNF268Q14587 947 aaPredicted RBP4.92□□□□□ -1.62
CLK1-203ENST00000409769 MVPQ14764 893 aaKnown RBP4.92□□□□□ -1.62
CLK1-203ENST00000409769 XRRA1Q6P2D8 792 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 SHC4Q6S5L8 630 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 VSTM1Q6UX27 236 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 SYTL1Q8IYJ3 562 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 MAFAQ8NHW3 353 aaPredicted RBP4.92□□□□□ -1.62
CLK1-203ENST00000409769 FRAT1Q92837 279 aaPredicted RBP4.92□□□□□ -1.62
CLK1-203ENST00000409769 HIC2Q96JB3 615 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 PAAF1Q9BRP4 392 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 RNF26Q9BY78 433 aaPredicted RBP4.92□□□□□ -1.62
CLK1-203ENST00000409769 HYPKQ9NX55 129 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 SLC39A10Q9ULF5 831 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 MAFFQ9ULX9 164 aa4.92□□□□□ -1.62
CLK1-203ENST00000409769 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.91□□□□□ -1.62
CLK1-203ENST00000409769 ABHD14A-ACY1A0A1B0GW23 586 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 FCHO1O14526 889 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 ZSCAN9O15535 394 aaPredicted RBP4.91□□□□□ -1.62
CLK1-203ENST00000409769 RNF8O76064 485 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 STARD3NLO95772 234 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 SCP2P22307 547 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 IL6STP40189 918 aaPredicted RBP4.91□□□□□ -1.62
CLK1-203ENST00000409769 CRKLP46109 303 aaKnown RBP4.91□□□□□ -1.62
CLK1-203ENST00000409769 PIP4K2AP48426 406 aaPredicted RBP4.91□□□□□ -1.62
CLK1-203ENST00000409769 EIF5P55010 431 aaKnown RBP4.91□□□□□ -1.62
CLK1-203ENST00000409769 GHRHRQ02643 423 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 ARHGAP15Q53QZ3 475 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 DCDC5Q6ZRR9 648 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 COPS6Q7L5N1 327 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 TMEM57Q8N5G2 664 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 FAM71DQ8N9W8 422 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.91□□□□□ -1.62
CLK1-203ENST00000409769 EXOC6Q8TAG9 804 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 RSC1A1Q92681 617 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 P2RY11Q96G91 374 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 WDR12Q9GZL7 423 aaKnown RBP4.91□□□□□ -1.62
CLK1-203ENST00000409769 SAP30LQ9HAJ7 183 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 KLHL13Q9P2N7 655 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 ZNF580Q9UK33 172 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 DDX19BQ9UMR2 479 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 ZBTB1Q9Y2K1 713 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 COL24A1Q17RW2 1714 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 CACNA1IQ9P0X4 2223 aa4.91□□□□□ -1.62
CLK1-203ENST00000409769 MYH3P11055 1940 aa4.9□□□□□ -1.62
CLK1-203ENST00000409769 PI4KAP2A4QPH2 592 aa4.9□□□□□ -1.63
CLK1-203ENST00000409769 PRAMEF2O60811 474 aa4.9□□□□□ -1.63
CLK1-203ENST00000409769 GCATO75600 419 aa4.9□□□□□ -1.63
CLK1-203ENST00000409769 MYL6BP14649 208 aa4.9□□□□□ -1.63
CLK1-203ENST00000409769 NPPBP16860 134 aa4.9□□□□□ -1.63
CLK1-203ENST00000409769 MATN1P21941 496 aa4.9□□□□□ -1.63
CLK1-203ENST00000409769 DUSP1P28562 367 aa4.9□□□□□ -1.63
CLK1-203ENST00000409769 CCKARP32238 428 aa4.9□□□□□ -1.63
CLK1-203ENST00000409769 KCNB1Q14721 858 aa4.9□□□□□ -1.63
CLK1-203ENST00000409769 TMEM196Q5HYL7 178 aa4.9□□□□□ -1.63
CLK1-203ENST00000409769 BEND3Q5T5X7 828 aa4.9□□□□□ -1.63
CLK1-203ENST00000409769 C10orf25Q5T742 122 aa4.9□□□□□ -1.63
CLK1-203ENST00000409769 TMEM65Q6PI78 240 aa4.9□□□□□ -1.63
CLK1-203ENST00000409769 PIK3AP1Q6ZUJ8 805 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms