RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 AADATQ8N5Z0 425 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 OR8D1Q8WZ84 308 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 C18orf8Q96DM3 657 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 PGAP3Q96FM1 320 aaPredicted RBP15.17■□□□□ 0.02
CBX3-203ENST00000409747 NPY6RQ99463 290 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 FEM1AQ9BSK4 669 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 KDM4CQ9H3R0 1056 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 WDCPQ9H6R7 721 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 PLCB1Q9NQ66 1216 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 PLXNA2O75051 1894 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 TMEM131Q92545 1883 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 C1QTNF3-AMACRE9PGA6 284 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 SLC7A4O43246 635 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 ATP9BO43861 1147 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 GABRB2P47870 512 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 CXCR3P49682 368 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 KRT83P78385 493 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 ACCSLQ4AC99 568 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 HSP90AA4PQ58FG1 418 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 SLC45A4Q5BKX6 768 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 FAM102AQ5T9C2 384 aaPredicted RBP15.16■□□□□ 0.02
CBX3-203ENST00000409747 LRRC31Q6UY01 552 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 OR14C36Q8NHC7 312 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 FRS2Q8WU20 508 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 SLC6A18Q96N87 628 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 TKTL2Q9H0I9 626 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 SIK2Q9H0K1 926 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 MUC3BQ9H195 1237 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 AASDHPPTQ9NRN7 309 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 PIGVQ9NUD9 493 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 ARHGEF38Q9NXL2 777 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 TBC1D30Q9Y2I9 924 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 FHOD1Q9Y613 1164 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 IGF2RP11717 2491 aa15.16■□□□□ 0.02
CBX3-203ENST00000409747 YKT6O15498 198 aa15.15■□□□□ 0.02
CBX3-203ENST00000409747 UCHL3P15374 230 aa15.15■□□□□ 0.02
CBX3-203ENST00000409747 NUDT1P36639 197 aa15.15■□□□□ 0.02
CBX3-203ENST00000409747 RNASE9P60153 205 aaKnown RBP15.15■□□□□ 0.02
CBX3-203ENST00000409747 DEUP1Q05D60 604 aa15.15■□□□□ 0.02
CBX3-203ENST00000409747 SLC25A52Q3SY17 297 aa15.15■□□□□ 0.02
CBX3-203ENST00000409747 TCP11X2Q5H9J9 407 aa15.15■□□□□ 0.02
CBX3-203ENST00000409747 LAYNQ6UX15 382 aa15.15■□□□□ 0.02
CBX3-203ENST00000409747 ERICH1Q86X53 443 aa15.15■□□□□ 0.02
CBX3-203ENST00000409747 PNPLA1Q8N8W4 532 aa15.15■□□□□ 0.02
CBX3-203ENST00000409747 NT5C3BQ969T7 300 aa15.15■□□□□ 0.02
CBX3-203ENST00000409747 ALG14Q96F25 216 aa15.15■□□□□ 0.02
CBX3-203ENST00000409747 CCDC114Q96M63 670 aa15.15■□□□□ 0.02
CBX3-203ENST00000409747 C2orf49Q9BVC5 232 aaPredicted RBP15.15■□□□□ 0.02
CBX3-203ENST00000409747 SPEGQ15772 3267 aa15.15■□□□□ 0.02
CBX3-203ENST00000409747 TP53BP1Q12888 1972 aaPredicted RBP15.15■□□□□ 0.02
CBX3-203ENST00000409747 H0Y8X5 98 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 TPM2P07951 284 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 RHOCP08134 193 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 VAV1P15498 845 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 CD38P28907 300 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 KCNMA1Q12791 1236 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 OTUD1Q5VV17 481 aaPredicted RBP15.14■□□□□ 0.01
CBX3-203ENST00000409747 DPY19L2P1Q6NXN4 242 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 SETD3Q86TU7 594 aaPredicted RBP15.14■□□□□ 0.01
CBX3-203ENST00000409747 FAM131CQ96AQ9 280 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 NAA15Q9BXJ9 866 aaKnown RBP15.14■□□□□ 0.01
CBX3-203ENST00000409747 STK33Q9BYT3 514 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 FARP1Q9Y4F1 1045 aaPredicted RBP15.14■□□□□ 0.01
CBX3-203ENST00000409747 OR51B4Q9Y5P0 310 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 FREM2Q5SZK8 3169 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 TBC1D3DA0A087WVF3 549 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 TBC1D3IA0A087WXS9 549 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 TBC1D3EA0A087X179 549 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 TBC1D3KA0A087X1G2 549 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 A0A1B0GTQ1 180 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 TBC1D3FA6NER0 549 aaPredicted RBP15.14■□□□□ 0.01
CBX3-203ENST00000409747 C10orf142B7Z368 130 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 TBC1D3LB9A6J9 549 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 F8VZ95 297 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 TNFSF14O43557 240 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 LATO43561 262 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 TBC1D3HP0C7X1 549 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 ZNF18P17022 549 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 DRD3P35462 400 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 GGCXP38435 758 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 NUMBP49757 651 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 IRAK1P51617 712 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 DLG2Q15700 870 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 C6orf118Q5T5N4 469 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 TBC1D3GQ6DHY5 549 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 TBC1D3CQ6IPX1 549 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.14■□□□□ 0.01
CBX3-203ENST00000409747 C14orf80Q86SX3 495 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 PRPF39Q86UA1 669 aaKnown RBP15.14■□□□□ 0.01
CBX3-203ENST00000409747 ZNF677Q86XU0 584 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 XYLT1Q86Y38 959 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 TBC1D3Q8IZP1 549 aaPredicted RBP15.14■□□□□ 0.01
CBX3-203ENST00000409747 SH2D3CQ8N5H7 860 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 SERAC1Q96JX3 654 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 C1orf74Q96LT6 269 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 ELF4Q99607 663 aaPredicted RBP15.14■□□□□ 0.01
CBX3-203ENST00000409747 GDF3Q9NR23 364 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 SAMSN1Q9NSI8 373 aaKnown RBP15.14■□□□□ 0.01
CBX3-203ENST00000409747 HS3ST2Q9Y278 367 aa15.14■□□□□ 0.01
CBX3-203ENST00000409747 CHD6Q8TD26 2715 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms