RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 ARHGAP12Q8IWW6 846 aa13.35□□□□□ -0.27
LIMS2-203ENST00000409254 CFAP52Q8N1V2 620 aa13.35□□□□□ -0.27
LIMS2-203ENST00000409254 PHTF2Q8N3S3 785 aa13.35□□□□□ -0.27
LIMS2-203ENST00000409254 TERB1Q8NA31 727 aa13.35□□□□□ -0.27
LIMS2-203ENST00000409254 C12orf50Q8NA57 414 aaPredicted RBP13.35□□□□□ -0.27
LIMS2-203ENST00000409254 RSAD2Q8WXG1 361 aa13.35□□□□□ -0.27
LIMS2-203ENST00000409254 SHDQ96IW2 340 aa13.35□□□□□ -0.27
LIMS2-203ENST00000409254 ZFYVE19Q96K21 471 aa13.35□□□□□ -0.27
LIMS2-203ENST00000409254 RUNDC3BQ96NL0 473 aa13.35□□□□□ -0.27
LIMS2-203ENST00000409254 ACE2Q9BYF1 805 aaPredicted RBP13.35□□□□□ -0.27
LIMS2-203ENST00000409254 DNAJC17Q9NVM6 304 aaKnown RBP13.35□□□□□ -0.27
LIMS2-203ENST00000409254 DTLQ9NZJ0 730 aa13.35□□□□□ -0.27
LIMS2-203ENST00000409254 CDC23Q9UJX2 597 aa13.35□□□□□ -0.27
LIMS2-203ENST00000409254 GGA2Q9UJY4 613 aa13.35□□□□□ -0.27
LIMS2-203ENST00000409254 HPCAL4Q9UM19 191 aa13.35□□□□□ -0.27
LIMS2-203ENST00000409254 OR51B4Q9Y5P0 310 aa13.35□□□□□ -0.27
LIMS2-203ENST00000409254 SPECC1L-ADORA2AF8WAN1 911 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 CCDC188H7C350 402 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 SCAMP3O14828 347 aaKnown RBP13.34□□□□□ -0.27
LIMS2-203ENST00000409254 MCF2LO15068 1137 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 MFSD11O43934 449 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 CISD3P0C7P0 127 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 DRD1P21728 446 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 HLA-FP30511 346 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 OPRD1P41143 372 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 GARSP41250 739 aaKnown RBP13.34□□□□□ -0.27
LIMS2-203ENST00000409254 GRIA2P42262 883 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 CLCN6P51797 869 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 TNK2Q07912 1038 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 PPIDQ08752 370 aaKnown RBP13.34□□□□□ -0.27
LIMS2-203ENST00000409254 ZNF211Q13398 564 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-203ENST00000409254 CCNG2Q16589 344 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 PLEKHG6Q3KR16 790 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 HSF5Q4G112 596 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-203ENST00000409254 FBXO43Q4G163 708 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 CCDC181Q5TID7 509 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 CIR1Q86X95 450 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-203ENST00000409254 CREG2Q8IUH2 290 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.34□□□□□ -0.27
LIMS2-203ENST00000409254 GJD3Q8N144 294 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 CARNMT1Q8N4J0 409 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 ATPAF2Q8N5M1 289 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 NPWQ8N729 165 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 COG1Q8WTW3 980 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 ARHGEF2Q92974 986 aaKnown RBP13.34□□□□□ -0.27
LIMS2-203ENST00000409254 NKD2Q969F2 451 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-203ENST00000409254 TTC17Q96AE7 1141 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 ALG14Q96F25 216 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 PNKPQ96T60 521 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 FEM1AQ9BSK4 669 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 COL25A1Q9BXS0 654 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-203ENST00000409254 MAGEB5Q9BZ81 275 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 NOL6Q9H6R4 1146 aaKnown RBP13.34□□□□□ -0.27
LIMS2-203ENST00000409254 ETNK2Q9NVF9 386 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 GTSE1Q9NYZ3 720 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 STARD13Q9Y3M8 1113 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 PIAS3Q9Y6X2 628 aa13.34□□□□□ -0.27
LIMS2-203ENST00000409254 TECTAO75443 2155 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 OTOL1A6NHN0 477 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-203ENST00000409254 RASA4BC9J798 803 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 RASA4O43374 803 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 APODP05090 189 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 ATP5BP06576 529 aaKnown RBP13.33□□□□□ -0.28
LIMS2-203ENST00000409254 ASGR2P07307 311 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 KRT10P13645 584 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 CCNCP24863 283 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 CXCR5P32302 372 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 TNFRSF4P43489 277 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 FNTAP49354 379 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 DNA2P51530 1060 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 LMNB2Q03252 620 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 IL10RBQ08334 325 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 LMAN2Q12907 356 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 MLF2Q15773 248 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-203ENST00000409254 LONRF2Q1L5Z9 754 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 INO80DQ53TQ3 878 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-203ENST00000409254 KAZNQ674X7 775 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 RETSATQ6NUM9 610 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 RNF135Q8IUD6 432 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 SLC35B2Q8TB61 432 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 UCMAQ8WVF2 138 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 P2RY11Q96G91 374 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 QKIQ96PU8 341 aaKnown RBP eCLIP13.33□□□□□ -0.28
LIMS2-203ENST00000409254 PSMB7Q99436 277 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 VAT1Q99536 393 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 MUC3BQ9H195 1237 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 ABCB8Q9NUT2 735 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 FEZ2Q9UHY8 353 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-203ENST00000409254 VPS28Q9UK41 221 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 HS3ST2Q9Y278 367 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 MRPS17Q9Y2R5 130 aaKnown RBP13.33□□□□□ -0.28
LIMS2-203ENST00000409254 MRFAP1Q9Y605 127 aa13.33□□□□□ -0.28
LIMS2-203ENST00000409254 BCLAF3A2AJT9 711 aaKnown RBP13.32□□□□□ -0.28
LIMS2-203ENST00000409254 KDELR3O43731 214 aa13.32□□□□□ -0.28
LIMS2-203ENST00000409254 PRAMEF11O60813 436 aa13.32□□□□□ -0.28
LIMS2-203ENST00000409254 ITGAVP06756 1048 aa13.32□□□□□ -0.28
LIMS2-203ENST00000409254 SRPRAP08240 638 aaKnown RBP13.32□□□□□ -0.28
LIMS2-203ENST00000409254 HSPA9P38646 679 aaKnown RBP13.32□□□□□ -0.28
LIMS2-203ENST00000409254 GBE1Q04446 702 aa13.32□□□□□ -0.28
LIMS2-203ENST00000409254 PRKD1Q15139 912 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms