RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 LZTS1Q9Y250 596 aa8.62□□□□□ -1.03
SH3D19-202ENST00000409252 TARSL2A2RTX5 802 aaKnown RBP8.61□□□□□ -1.03
SH3D19-202ENST00000409252 MAP4P27816 1152 aaKnown RBP8.61□□□□□ -1.03
SH3D19-202ENST00000409252 TYK2P29597 1187 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 L1CAMP32004 1257 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 KCNQ1P51787 676 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 PFKPQ01813 784 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 CDH17Q12864 832 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 SETDB1Q15047 1291 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 MAP7D1Q3KQU3 841 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 TCEAL5Q5H9L2 206 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 PPP1R15BQ5SWA1 713 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 NXNQ6DKJ4 435 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 GLT6D1Q7Z4J2 308 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 ARID3BQ8IVW6 561 aaPredicted RBP8.61□□□□□ -1.03
SH3D19-202ENST00000409252 TRIM48Q8IWZ4 208 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 PYROXD2Q8N2H3 581 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 PDCD7Q8N8D1 485 aaKnown RBP8.61□□□□□ -1.03
SH3D19-202ENST00000409252 EPC1Q9H2F5 836 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 NSMCE4AQ9NXX6 385 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 VPS9D1Q9Y2B5 631 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 FIS1Q9Y3D6 152 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 ERICH4A6NGS2 130 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 SDR42E2A6NKP2 422 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 MAPKAPK2P49137 400 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 MAXP61244 160 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 GNA12Q03113 381 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 DSC1Q08554 894 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 CCDC157Q569K6 752 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 BBS12Q6ZW61 710 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 TRMT11Q7Z4G4 463 aaKnown RBP8.61□□□□□ -1.03
SH3D19-202ENST00000409252 PSTKQ8IV42 348 aaKnown RBP8.61□□□□□ -1.03
SH3D19-202ENST00000409252 OR7D4Q8NG98 312 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 LRRC8CQ8TDW0 803 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 LRRN4Q8WUT4 740 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 SHDQ96IW2 340 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 SPATA17Q96L03 361 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 LGMNQ99538 433 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 TMPRSS4Q9NRS4 437 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 ABCB8Q9NUT2 735 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 ZDHHC7Q9NXF8 308 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 SPAG6O75602 509 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 TPH1P17752 444 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 CHRM3P20309 590 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 PBLDP30039 288 aaPredicted RBP8.61□□□□□ -1.03
SH3D19-202ENST00000409252 MAGEA4P43358 317 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 CCT5P48643 541 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 ATP1A2P50993 1020 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 CSE1LP55060 971 aaKnown RBP8.61□□□□□ -1.03
SH3D19-202ENST00000409252 RPS6KA2Q15349 733 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 ADGRF1Q5T601 910 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 C1orf53Q5VUE5 145 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 LINGO4Q6UY18 593 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 TTC7BQ86TV6 843 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 TCEAL8Q8IYN2 117 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 TTC9BQ8N6N2 239 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 CFAP61Q8NHU2 1237 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 TSPAN17Q96FV3 270 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 MIR1-1HGQ9H1L0 117 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 TMLHEQ9NVH6 421 aa8.61□□□□□ -1.03
SH3D19-202ENST00000409252 REXO2Q9Y3B8 237 aaKnown RBP8.61□□□□□ -1.03
SH3D19-202ENST00000409252 A0A0A0MRY4 1105 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 BEST1O76090 585 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 VCLP18206 1134 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 NFKB1P19838 968 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 PSMD8P48556 350 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 ZNF132P52740 706 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 OLFML1Q6UWY5 402 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 ALKAL1Q6UXT8 129 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 RD3Q7Z3Z2 195 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 MMGT1Q8N4V1 131 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 SPATA13Q96N96 652 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 EBF3Q9H4W6 596 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.6□□□□□ -1.03
SH3D19-202ENST00000409252 PKD2L2Q9NZM6 624 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 FNIP2Q9P278 1114 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 RAD54BQ9Y620 910 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.6□□□□□ -1.03
SH3D19-202ENST00000409252 HIDE1A8MVS5 230 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 MEI4A8MW99 385 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 COCHO43405 550 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 MFSD11O43934 449 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 RHOBTB1O94844 696 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 PYGLP06737 847 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 TROVE2P10155 538 aaKnown RBP eCLIP8.6□□□□□ -1.03
SH3D19-202ENST00000409252 PSMB4P28070 264 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 OAS2P29728 719 aaKnown RBP8.6□□□□□ -1.03
SH3D19-202ENST00000409252 YBEYP58557 167 aaPredicted RBP8.6□□□□□ -1.03
SH3D19-202ENST00000409252 ERVFC1P60507 584 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 RPS24P62847 133 aaKnown RBP8.6□□□□□ -1.03
SH3D19-202ENST00000409252 NTHL1P78549 312 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 USP10Q14694 798 aaKnown RBP8.6□□□□□ -1.03
SH3D19-202ENST00000409252 ZBTB6Q15916 424 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 ANKRD20A2Q5SQ80 823 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 ANKRD20A1Q5TYW2 823 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 ANKRD20A3Q5VUR7 823 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 RTL3Q8N8U3 475 aaKnown RBP8.6□□□□□ -1.03
SH3D19-202ENST00000409252 NOA1Q8NC60 698 aaKnown RBP8.6□□□□□ -1.03
SH3D19-202ENST00000409252 WFIKKN2Q8TEU8 576 aa8.6□□□□□ -1.03
SH3D19-202ENST00000409252 RILPQ96NA2 401 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms