RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 ARHGEF38Q9NXL2 777 aa4.08□□□□□ -1.76
LRRTM4-201ENST00000409088 UBP1Q9NZI7 540 aa4.08□□□□□ -1.76
LRRTM4-201ENST00000409088 MPP6Q9NZW5 540 aa4.08□□□□□ -1.76
LRRTM4-201ENST00000409088 SAMD15Q9P1V8 674 aa4.08□□□□□ -1.76
LRRTM4-201ENST00000409088 IGSF9Q9P2J2 1179 aa4.08□□□□□ -1.76
LRRTM4-201ENST00000409088 SMG5Q9UPR3 1016 aaKnown RBP4.08□□□□□ -1.76
LRRTM4-201ENST00000409088 SCML2Q9UQR0 700 aa4.08□□□□□ -1.76
LRRTM4-201ENST00000409088 WDR91A4D1P6 747 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 MTMR11A4FU01 709 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ARHGAP42A6NI28 874 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TRIM49D1C9J1S8 452 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 C2CD2LO14523 706 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TRDMT1O14717 391 aaKnown RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 PRPF4O43172 522 aaKnown RBP eCLIP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 SIAH2O43255 324 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ASMTLO95671 621 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 RPL17P18621 184 aaKnown RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 NFKB1P19838 968 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 FOXN2P32314 431 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ALDH7A1P49419 539 aaKnown RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TBX4P57082 545 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 GALNT2Q10471 571 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 GPR17Q13304 367 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 PPP2R5DQ14738 602 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TRIM60Q495X7 471 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 C10orf120Q5SQS8 335 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 SPOUT1Q5T280 376 aaKnown RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 FAM117BQ6P1L5 589 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 LRRC8BQ6P9F7 803 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 LVRNQ6Q4G3 990 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 CES3Q6UWW8 571 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 SLC39A5Q6ZMH5 540 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 FAM47EQ6ZV65 393 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 OTUD6BQ8N6M0 293 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 CCDC197Q8NCU1 140 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 GSDMBQ8TAX9 411 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 DENND1AQ8TEH3 1009 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 BCL7CQ8WUZ0 217 aaPredicted RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TBC1D31Q96DN5 1066 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 MAGEB18Q96M61 343 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 SERPINB11Q96P15 392 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 APOL2Q9BQE5 337 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TTPALQ9BTX7 342 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 MRPL9Q9BYD2 267 aaKnown RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 NSRP1Q9H0G5 558 aaKnown RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 CATSPERBQ9H7T0 1116 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 SAGE1Q9NXZ1 904 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 OGDHLQ9ULD0 1010 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 VANGL2Q9ULK5 521 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 PCDHA11Q9Y5I1 949 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 RAD54BQ9Y620 910 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 HS3ST4Q9Y661 456 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 CDY1Q9Y6F8 540 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 MKI67P46013 3256 aaKnown RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 GOLGA6L7A0A1B0GV03 622 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 KCNU1A8MYU2 1149 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 E9PAM4 449 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 H7C4K7 107 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 MYO1CO00159 1063 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ADAM12O43184 909 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 MTSS1O43312 755 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TYROBPO43914 113 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 C1QAP02745 245 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 SNRPAP09012 282 aaKnown RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 CSH1P0DML2 217 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 CSH2P0DML3 217 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 MLNP12872 115 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TAC1P20366 129 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 PRKCHP24723 683 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 CD68P34810 354 aaPredicted RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 MAGEA11P43364 429 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 MLLT6P55198 1093 aaPredicted RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ELAVL2Q12926 359 aaKnown RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 DNAJC3Q13217 504 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 BMPR2Q13873 1038 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 PSMD5Q16401 504 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 LGSNQ5TDP6 509 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ZNF697Q5TEC3 545 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 MROH9Q5TGP6 573 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 RASIP1Q5U651 963 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TTC39BQ5VTQ0 682 aaPredicted RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 KIAA1841Q6NSI8 718 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ANKS3Q6ZW76 656 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 OTOP3Q7RTS5 596 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 SPATS2Q86XZ4 545 aaKnown RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ARHGAP18Q8N392 663 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ATPAF2Q8N5M1 289 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ANKS4BQ8N8V4 417 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 SPPL2BQ8TCT7 592 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TCP10LQ8TDR4 215 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 MZB1Q8WU39 189 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ARNTL2Q8WYA1 636 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 SERAC1Q96JX3 654 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 SLC39A8Q9C0K1 460 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 BRD8Q9H0E9 1235 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ALG13Q9NP73 1137 aaKnown RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 SYBUQ9NX95 663 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 IL1RAPL1Q9NZN1 696 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ATP11BQ9Y2G3 1177 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TSC2P49815 1807 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms