RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 PHLDB2Q86SQ0 1253 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 ZNF677Q86XU0 584 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 AADATQ8N5Z0 425 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 ORAI3Q9BRQ5 295 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 HSD3B7Q9H2F3 369 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 LIMA1Q9UHB6 759 aaKnown RBP19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 VPS28Q9UK41 221 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 TBC1D30Q9Y2I9 924 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 CYP1A1P04798 512 aaPredicted RBP19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 AFF3P51826 1226 aaKnown RBP19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 CDH4P55283 916 aa19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 SIM1P81133 766 aaPredicted RBP19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 SLC14A1Q13336 389 aa19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 NCAPHQ15003 741 aa19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 ARTNQ5T4W7 220 aa19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 LAYNQ6UX15 382 aa19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 BNIPLQ7Z465 357 aa19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 EMC1Q8N766 993 aa19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 MSANTD4Q8NCY6 345 aa19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 SLC30A5Q8TAD4 765 aa19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 OMDQ99983 421 aa19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 GAREM1Q9H706 876 aa19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 TM9SF3Q9HD45 589 aa19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 TP53BP1Q12888 1972 aaPredicted RBP19.83■□□□□ 0.76
SMARCB1-204ENST00000407422 DOCK9Q9BZ29 2069 aa19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 LGALS16A8MUM7 142 aa19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 IL1BP01584 269 aa19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 CD27P26842 260 aa19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 METAP1P53582 386 aa19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 ELAVL3Q14576 367 aaKnown RBP19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 HLA-BQ31612 363 aa19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 RAB6CQ53S08 254 aa19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 KIAA0895LQ68EN5 471 aa19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 NCEH1Q6PIU2 408 aa19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 PCMTD1Q96MG8 357 aaPredicted RBP19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 SPAG5Q96R06 1193 aa19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 RAB6CQ9H0N0 254 aa19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 METTL5Q9NRN9 209 aaKnown RBP19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 MPP6Q9NZW5 540 aa19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 ADAMTS1Q9UHI8 967 aa19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 FNDC3AQ9Y2H6 1198 aaKnown RBP19.82■□□□□ 0.76
SMARCB1-204ENST00000407422 MMP8P22894 467 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 KIF19Q2TAC6 998 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 ACCSLQ4AC99 568 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 CCDC183Q5T5S1 534 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 APTXQ7Z2E3 356 aaKnown RBP19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 FAM131BQ86XD5 332 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 C1orf74Q96LT6 269 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 PPP1R9BQ96SB3 815 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 PCDHB18PQ96TA0 734 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 C11orf70Q9BRQ4 267 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 MUC3BQ9H195 1237 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 EBF2Q9HAK2 575 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 SLC25A13Q9UJS0 675 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 FZD4Q9ULV1 537 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 PAXBP1Q9Y5B6 917 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 IGF2RP11717 2491 aa19.81■□□□□ 0.76
SMARCB1-204ENST00000407422 LRRC10BA6NIK2 292 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 DRGXA6NNA5 263 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 ATP9BO43861 1147 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 GJB6O95452 261 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 ADH1BP00325 375 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 MT-CO1P00395 513 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 C5AR1P21730 350 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 RDXP35241 583 aaKnown RBP19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 STAT1P42224 750 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 VASPP50552 380 aaPredicted RBP19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 ATP11AP98196 1134 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 UBXN1Q04323 297 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 DLG2Q15700 870 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 KCNT1Q5JUK3 1230 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 ARCQ7LC44 396 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 TFAP2DQ7Z6R9 452 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 NAXDQ8IW45 347 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 ANKRD20A12PQ8NF67 263 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 PSMB7Q99436 277 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 OSGEPQ9NPF4 335 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 SARDHQ9UL12 918 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 SNX11Q9Y5W9 270 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 CFAP47Q6ZTR5 3102 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 ZZEF1O43149 2961 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 A0A0D9SEW6 157 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 E9PAM4 449 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 PLK4O00444 970 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 SNAP91O60641 907 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 SRGAP2O75044 1071 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 CER1O95813 267 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 MBD3O95983 291 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 RHOCP08134 193 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 GOT1P17174 413 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 CDK11BP21127 795 aaKnown RBP19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 DRD3P35462 400 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 SFSWAPQ12872 951 aaKnown RBP19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 IL27RAQ6UWB1 636 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 LRSAM1Q6UWE0 723 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 LRRC31Q6UY01 552 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 Q6ZVU0 165 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 SH2D3CQ8N5H7 860 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 NEK11Q8NG66 645 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 TMEM63CQ9P1W3 806 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms