RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ZMPSTE24O75844 475 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 IGHA2P01877 340 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 ADRA1BP35368 520 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 DAOAP59103 153 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 DGKDQ16760 1214 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 DNAL1Q4LDG9 190 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 SFT2D3Q587I9 215 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 PRAMEF19Q5SWL8 479 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 WSCD1Q658N2 575 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 LSMEM2Q8N112 164 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 TOP6BLQ8N6T0 577 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 CNTD1Q8N815 330 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 APPL2Q8NEU8 664 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 BRI3BPQ8WY22 251 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 NTAN1Q96AB6 310 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 SHCBP1LQ9BZQ2 653 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 DNAI2Q9GZS0 605 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 GBA3Q9H227 469 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 COG4Q9H9E3 785 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 MAN1C1Q9NR34 630 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 CDH22Q9UJ99 828 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 SYNJ2BP-COX16A0A087WUM0 186 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 PDE5AO76074 875 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 CHRNGP07510 517 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 PTPN1P18031 435 aaKnown RBP10.06□□□□□ -0.8
MSH2-202ENST00000406134 DPP6P42658 865 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 TAF6P49848 677 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 GALNT2Q10471 571 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 ANKRD20A4Q4UJ75 823 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 GRTP1Q5TC63 336 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 CASC4Q6P4E1 433 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 ARHGAP36Q6ZRI8 547 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 PDSS2Q86YH6 399 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 ATXN7L3BQ96GX2 97 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 GPR78Q96P69 363 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 PTPN18Q99952 460 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 ECSITQ9BQ95 431 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.06□□□□□ -0.8
MSH2-202ENST00000406134 ZDHHC7Q9NXF8 308 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 COX16Q9P0S2 106 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 SEPT10Q9P0V9 454 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 FBXW11Q9UKB1 542 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 VWA8A3KMH1 1905 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 RALBP11234 206 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 NMBRP28336 390 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 ARL4AP40617 200 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 GRIA2P42262 883 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 NME3Q13232 169 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 SNAPC2Q13487 334 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 OLFML2BQ68BL8 750 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 PDPK2PQ6A1A2 396 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 CCNJLQ8IV13 435 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 PYDC1Q8WXC3 89 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 HDAC11Q96DB2 347 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 CDH19Q9H159 772 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 EBF3Q9H4W6 596 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 PRDM16Q9HAZ2 1276 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 CHRAC1Q9NRG0 131 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 DLGAP2Q9P1A6 1054 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 EEF2KO00418 725 aaKnown RBP10.05□□□□□ -0.8
MSH2-202ENST00000406134 PGFP49763 221 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 MAP3K7CLP57077 242 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 INHBEP58166 350 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 DEUP1Q05D60 604 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 DLG1Q12959 904 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 PDK1Q15118 436 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 TSNAXIP1Q2TAA8 658 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 BSPRYQ5W0U4 402 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 IZUMO2Q6UXV1 221 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 CENPLQ8N0S6 344 aaPredicted RBP10.05□□□□□ -0.8
MSH2-202ENST00000406134 AGAP3Q96P47 875 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 TUBGCP5Q96RT8 1024 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 PAAF1Q9BRP4 392 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 TINF2Q9BSI4 451 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 ULBP1Q9BZM6 244 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 MIOSQ9NXC5 875 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 ADAM28Q9UKQ2 775 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 VANGL2Q9ULK5 521 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 PIN4Q9Y237 131 aaKnown RBP10.05□□□□□ -0.8
MSH2-202ENST00000406134 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.05□□□□□ -0.8
MSH2-202ENST00000406134 MYBPHLA2RUH7 354 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 GRID2O43424 1007 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 IGLV3-25P01717 112 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 CD4P01730 458 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 SARNPP82979 210 aaKnown RBP10.05□□□□□ -0.8
MSH2-202ENST00000406134 PPM1LQ5SGD2 360 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 NAIF1Q69YI7 327 aaPredicted RBP10.05□□□□□ -0.8
MSH2-202ENST00000406134 DENND5AQ6IQ26 1287 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 FBXL19Q6PCT2 694 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 CD300LGQ6UXG3 332 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 STRA8Q7Z7C7 330 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 HPS6Q86YV9 775 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 ZNF669Q96BR6 464 aaPredicted RBP10.05□□□□□ -0.8
MSH2-202ENST00000406134 RILPQ96NA2 401 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 SLC9A7Q96T83 725 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 PKMYT1Q99640 499 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 POMPQ9Y244 141 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 TK2O00142 265 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 POLBP06746 335 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 SLC35E2BP0CK96 405 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms