RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 NFIL3Q16649 462 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ISXQ2M1V0 245 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 FOXD4L6Q3SYB3 417 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 CBWD6Q4V339 395 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ZCWPW2Q504Y3 356 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SLC45A4Q5BKX6 768 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ZNF542PQ5EBM4 170 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 CBWD3Q5JTY5 395 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 CBWD5Q5RIA9 395 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 FOXD4L5Q5VV16 416 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 BROXQ5VW32 411 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 FOXD4L3Q6VB84 417 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 INTS8Q75QN2 995 aaKnown RBP12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PRPF39Q86UA1 669 aaKnown RBP12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TRIM69Q86WT6 500 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 CIR1Q86X95 450 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 OR13H1Q8NG92 308 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 DQX1Q8TE96 717 aaKnown RBP12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SLC35F5Q8WV83 523 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 FOXD4L4Q8WXT5 416 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ALG14Q96F25 216 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ATXN7L3BQ96GX2 97 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 IPO9Q96P70 1041 aaKnown RBP12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 DPH1Q9BZG8 443 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 IRX2Q9BZI1 471 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 CNGB3Q9NQW8 809 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 EXOC1Q9NV70 894 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 KLHL11Q9NVR0 708 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 RAB20Q9NX57 234 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SATB2Q9UPW6 733 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ITPR2Q14571 2701 aa12.27□□□□□ -0.44
SPTLC1P3-201ENST00000403408 RNF225M0QZC1 329 aaPredicted RBP12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SLC31A1O15431 190 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 NEFLP07196 543 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CENPBP07199 599 aaPredicted RBP12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CTSLP07711 333 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 THEGLP0DJG4 465 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TRIM21P19474 475 aaKnown RBP12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 IRAK1P51617 712 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CLDN2P57739 230 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PITX1P78337 314 aaPredicted RBP12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SFSWAPQ12872 951 aaKnown RBP12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CLN3Q13286 438 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ELAVL3Q14576 367 aaKnown RBP12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 DRAP1Q14919 205 aaPredicted RBP12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 C3orf38Q5JPI3 329 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 COLEC12Q5KU26 742 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PIP5KL1Q5T9C9 394 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 NUGGCQ68CJ6 796 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 KRT39Q6A163 491 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 IGF2-ASQ6U949 168 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 GCNT7Q6ZNI0 430 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 UNC45BQ8IWX7 931 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SIX6OS1Q8N1H7 587 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 KLHDC7BQ96G42 594 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SLC46A1Q96NT5 459 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 DEPDC7Q96QD5 511 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 IL17BQ9UHF5 180 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 KLF15Q9UIH9 416 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PPM1HQ9ULR3 514 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 NAALADL1Q9UQQ1 740 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 DMTF1Q9Y222 760 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ENTPD2Q9Y5L3 495 aa12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TEP1Q99973 2627 aaKnown RBP12.27□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CDRT15L2A8MXV6 281 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PRAMEF26H0Y7S4 382 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 K7ESM1 405 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TERTO14746 1132 aaKnown RBP12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CALUO43852 315 aaPredicted RBP12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 MOCS2O96007 188 aaPredicted RBP12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 LTFP02788 710 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PDGFRAP16234 1089 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CSRP3P50461 194 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 MXI1P50539 228 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PDX1P52945 283 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ENPEPQ07075 957 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 OVGP1Q12889 678 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CDH18Q13634 790 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 STAT4Q14765 748 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ZNF284Q2VY69 593 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SGO2Q562F6 1265 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TPRG1LQ5T0D9 272 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SYPL2Q5VXT5 272 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 RAP1GAP2Q684P5 730 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CXorf57Q6NSI4 855 aaKnown RBP12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 LCLAT1Q6UWP7 414 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TAC4Q86UU9 113 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 LGI2Q8N0V4 545 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 LSMEM2Q8N112 164 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 FBXL13Q8NEE6 735 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 FAXDC2Q96IV6 333 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 KDM4CQ9H3R0 1056 aa12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ZFR2Q9UPR6 939 aaKnown RBP12.26□□□□□ -0.45
SPTLC1P3-201ENST00000403408 A0A1W2PQU0 124 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SLC7A4O43246 635 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 RNGTTO60942 597 aaKnown RBP12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 GP1BAP07359 652 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CD19P15391 556 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ITGB6P18564 788 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TACR2P21452 398 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms