RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 UGT1A7Q9HAW7 530 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 UGT1A10Q9HAW8 530 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 UGT1A8Q9HAW9 530 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 FGFR1OP2Q9NVK5 253 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 TMEM248Q9NWD8 314 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 MKS1Q9NXB0 559 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 MARCH2Q9P0N8 246 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 HSFX1Q9UBD0 423 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 DRGXA6NNA5 263 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 TRIM49D1C9J1S8 452 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 DFFAO00273 331 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 DHRS4L1P0CG22 281 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 CCNFP41002 786 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 NPY2RP49146 381 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 NDST2P52849 883 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 PSMD5Q16401 504 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 SNX30Q5VWJ9 437 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 TIFABQ6ZNK6 161 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 TMEM135Q86UB9 458 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 CNPY4Q8N129 248 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 CABS1Q96KC9 395 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 FCRL5Q96RD9 977 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 ELAC2Q9BQ52 826 aaKnown RBP12.53□□□□□ -0.4
CLIP4-203ENST00000401617 BEGAINQ9BUH8 593 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 LRRC40Q9H9A6 602 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 MPP6Q9NZW5 540 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 ZNF212Q9UDV6 495 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 RFPL1O75677 317 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 KRT38O76015 456 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 DNAJB2P25686 324 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 CNTFP26441 200 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 ETV4P43268 484 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 TUFMP49411 452 aaKnown RBP12.53□□□□□ -0.4
CLIP4-203ENST00000401617 IFT88Q13099 833 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 MTA1Q13330 715 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 OLIG2Q13516 323 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 SPANXN3Q5MJ09 141 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 C10orf120Q5SQS8 335 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 TIGD7Q6NT04 549 aaPredicted RBP12.53□□□□□ -0.4
CLIP4-203ENST00000401617 CASC4Q6P4E1 433 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 LVRNQ6Q4G3 990 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 TCP10LQ8TDR4 215 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 DIS3LQ8TF46 1054 aaKnown RBP12.53□□□□□ -0.4
CLIP4-203ENST00000401617 TOP1MTQ969P6 601 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 APOPT1Q96IL0 206 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 ZYG11BQ9C0D3 744 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 RC3H2Q9HBD1 1191 aaKnown RBP12.53□□□□□ -0.4
CLIP4-203ENST00000401617 GLOD4Q9HC38 313 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 PIH1D1Q9NWS0 290 aaKnown RBP12.53□□□□□ -0.4
CLIP4-203ENST00000401617 DONSONQ9NYP3 566 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 BFARQ9NZS9 450 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 SAMD15Q9P1V8 674 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 AFF4Q9UHB7 1163 aaKnown RBP12.53□□□□□ -0.4
CLIP4-203ENST00000401617 VANGL2Q9ULK5 521 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 ANAPC1Q9H1A4 1944 aa12.53□□□□□ -0.4
CLIP4-203ENST00000401617 ABHD14A-ACY1A0A1B0GW23 586 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 MAGEB16A2A368 324 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 GOLGA8RI6L899 631 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 AP3B1O00203 1094 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 ABLIM3O94929 683 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 UPP2O95045 317 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 PEX11BO96011 259 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 POLBP06746 335 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 PYGBP11216 843 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 ALADP13716 330 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 OR1D2P34982 312 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 PAPOLAP51003 745 aaKnown RBP12.52□□□□□ -0.4
CLIP4-203ENST00000401617 KPNA1P52294 538 aaPredicted RBP12.52□□□□□ -0.4
CLIP4-203ENST00000401617 DNAJC3Q13217 504 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 PRPSAP1Q14558 356 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 HHATQ5VTY9 493 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 OTOP3Q7RTS5 596 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 UNC5BQ8IZJ1 945 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 GIPC2Q8TF65 315 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 OVCA2Q8WZ82 227 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 GRAMD1AQ96CP6 724 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 ZNF333Q96JL9 665 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 KLF6Q99612 283 aaPredicted RBP12.52□□□□□ -0.4
CLIP4-203ENST00000401617 CLSTN3Q9BQT9 956 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 VPS11Q9H270 941 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 WBP1LQ9NX94 342 aa12.52□□□□□ -0.4
CLIP4-203ENST00000401617 HBS1LQ9Y450 684 aaKnown RBP12.52□□□□□ -0.4
CLIP4-203ENST00000401617 FAM237BA0A1B0GVD1 139 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 TLR5O60602 858 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 USP1O94782 785 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 SOD2P04179 222 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 TNK2Q07912 1038 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 MGAT5Q09328 741 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 C5orf22Q49AR2 442 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 NAPEPLDQ6IQ20 393 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 CGB2Q6NT52 195 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 FBXL22Q6P050 247 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 LINC00523Q86TU6 105 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 FCRL3Q96P31 734 aaPredicted RBP12.52□□□□□ -0.41
CLIP4-203ENST00000401617 PPP1R2P1Q96PQ5 205 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 CDK5RAP1Q96SZ6 601 aaKnown RBP12.52□□□□□ -0.41
CLIP4-203ENST00000401617 CCSER2Q9H7U1 834 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 TMEM39AQ9NV64 488 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 SLC17A7Q9P2U7 560 aa12.52□□□□□ -0.41
CLIP4-203ENST00000401617 PRKAG3Q9UGI9 489 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms