RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SPPL3Q8TCT6 385 aa26.21■■□□□ 1.79
CPNE1-205ENST00000401607 FBF1Q8TES7 1133 aa26.21■■□□□ 1.79
CPNE1-205ENST00000401607 HMCESQ96FZ2 354 aa26.21■■□□□ 1.79
CPNE1-205ENST00000401607 C17orf80Q9BSJ5 609 aa26.21■■□□□ 1.79
CPNE1-205ENST00000401607 MLPHQ9BV36 600 aaPredicted RBP26.21■■□□□ 1.79
CPNE1-205ENST00000401607 DONSONQ9NYP3 566 aa26.21■■□□□ 1.79
CPNE1-205ENST00000401607 IPO11Q9UI26 975 aaKnown RBP26.21■■□□□ 1.79
CPNE1-205ENST00000401607 ARHGAP42A6NI28 874 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 ARHGEF15O94989 841 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 CSPG5O95196 566 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 C8AP07357 584 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 CORO1AP31146 461 aaKnown RBP26.2■■□□□ 1.79
CPNE1-205ENST00000401607 SLC11A2P49281 568 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 PPP2R2AP63151 447 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 EFTUD2Q15029 972 aaKnown RBP eCLIP26.2■■□□□ 1.796e-8■■■■□ 26.4
CPNE1-205ENST00000401607 PLPP4Q5VZY2 271 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 KCTD11Q693B1 232 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 TIGD7Q6NT04 549 aaPredicted RBP26.2■■□□□ 1.79
CPNE1-205ENST00000401607 RFWD3Q6PCD5 774 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 TDRPQ86YL5 185 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 CYP4X1Q8N118 509 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 POF1BQ8WVV4 589 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 AZIN2Q96A70 460 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 ZFRQ96KR1 1074 aaKnown RBP26.2■■□□□ 1.79
CPNE1-205ENST00000401607 EMILIN2Q9BXX0 1053 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 LRRC3Q9BY71 257 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 STMN4Q9H169 189 aaPredicted RBP26.2■■□□□ 1.79
CPNE1-205ENST00000401607 ACSS3Q9H6R3 686 aa26.2■■□□□ 1.79
CPNE1-205ENST00000401607 C2orf71A6NGG8 1288 aa26.2■■□□□ 1.78
CPNE1-205ENST00000401607 RASA4BC9J798 803 aa26.2■■□□□ 1.78
CPNE1-205ENST00000401607 RASA4O43374 803 aa26.2■■□□□ 1.78
CPNE1-205ENST00000401607 CACNG3O60359 315 aa26.2■■□□□ 1.78
CPNE1-205ENST00000401607 AP2A1O95782 977 aa26.2■■□□□ 1.78
CPNE1-205ENST00000401607 SPARCL1Q14515 664 aa26.2■■□□□ 1.78
CPNE1-205ENST00000401607 TMC8Q8IU68 726 aa26.2■■□□□ 1.78
CPNE1-205ENST00000401607 RIBC1Q8N443 379 aaPredicted RBP26.2■■□□□ 1.78
CPNE1-205ENST00000401607 MRPL43Q8N983 215 aaKnown RBP26.2■■□□□ 1.78
CPNE1-205ENST00000401607 KREMEN2Q8NCW0 462 aa26.2■■□□□ 1.78
CPNE1-205ENST00000401607 MAML1Q92585 1016 aa26.2■■□□□ 1.78
CPNE1-205ENST00000401607 CFAP36Q96G28 342 aa26.2■■□□□ 1.78
CPNE1-205ENST00000401607 SLC22A12Q96S37 553 aa26.2■■□□□ 1.78
CPNE1-205ENST00000401607 MTIF3Q9H2K0 278 aaKnown RBP26.2■■□□□ 1.78
CPNE1-205ENST00000401607 POC1B-GALNT4F8VUJ3 575 aa26.19■■□□□ 1.78
CPNE1-205ENST00000401607 SUN1O94901 812 aa26.19■■□□□ 1.78
CPNE1-205ENST00000401607 OLFM2O95897 454 aa26.19■■□□□ 1.78
CPNE1-205ENST00000401607 PEX11BO96011 259 aa26.19■■□□□ 1.78
CPNE1-205ENST00000401607 LRG1P02750 347 aa26.19■■□□□ 1.78
CPNE1-205ENST00000401607 CCDC149Q6ZUS6 474 aa26.19■■□□□ 1.78
CPNE1-205ENST00000401607 KLHDC8BQ8IXV7 354 aa26.19■■□□□ 1.78
CPNE1-205ENST00000401607 HS6ST3Q8IZP7 471 aa26.19■■□□□ 1.78
CPNE1-205ENST00000401607 CFAP52Q8N1V2 620 aa26.19■■□□□ 1.78
CPNE1-205ENST00000401607 ARFGAP2Q8N6H7 521 aa26.19■■□□□ 1.78
CPNE1-205ENST00000401607 XPO6Q96QU8 1125 aaKnown RBP26.19■■□□□ 1.78
CPNE1-205ENST00000401607 ZC3H7BQ9UGR2 993 aaKnown RBP26.19■■□□□ 1.78
CPNE1-205ENST00000401607 TBK1Q9UHD2 729 aa26.19■■□□□ 1.78
CPNE1-205ENST00000401607 TCRBV9S1A1TA0A576 114 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 SPAG6O75602 509 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 CPP00450 1065 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 IRF1P10914 325 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 MBL2P11226 248 aaPredicted RBP26.18■■□□□ 1.78
CPNE1-205ENST00000401607 MMP13P45452 471 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 MAPKAPK2P49137 400 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 OLIG2Q13516 323 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 PABPC1LQ4VXU2 614 aaKnown RBP26.18■■□□□ 1.78
CPNE1-205ENST00000401607 OTOP3Q7RTS5 596 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 EXOC3L1Q86VI1 746 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 PRICKLE1Q96MT3 831 aaPredicted RBP26.18■■□□□ 1.78
CPNE1-205ENST00000401607 CYP2S1Q96SQ9 504 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 EBNA1BP2Q99848 306 aaKnown RBP26.18■■□□□ 1.78
CPNE1-205ENST00000401607 LBHD1Q9BQE6 289 aaPredicted RBP26.18■■□□□ 1.78
CPNE1-205ENST00000401607 TRPC7Q9HCX4 862 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 FETUBQ9UGM5 382 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 C1QAP02745 245 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 MYOGP15173 224 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 GABRR2P28476 465 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 TXNDC8Q6A555 127 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 GAREM2Q75VX8 874 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 OXNAD1Q96HP4 312 aaPredicted RBP26.18■■□□□ 1.78
CPNE1-205ENST00000401607 PPCSQ9HAB8 311 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 TLR9Q9NR96 1032 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 PIH1D1Q9NWS0 290 aaKnown RBP26.18■■□□□ 1.78
CPNE1-205ENST00000401607 SMPD4Q9NXE4 827 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 SLC24A2Q9UI40 661 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 AGO1Q9UL18 857 aaKnown RBP26.18■■□□□ 1.78
CPNE1-205ENST00000401607 RWDD3Q9Y3V2 267 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 TTLL3Q9Y4R7 772 aa26.18■■□□□ 1.78
CPNE1-205ENST00000401607 ERI2A8K979 691 aaKnown RBP26.17■■□□□ 1.78
CPNE1-205ENST00000401607 SHOX2O60902 331 aaPredicted RBP26.17■■□□□ 1.78
CPNE1-205ENST00000401607 GLUD1P00367 558 aa26.17■■□□□ 1.78
CPNE1-205ENST00000401607 GEMIN4P57678 1058 aaKnown RBP26.17■■□□□ 1.78
CPNE1-205ENST00000401607 KLHL38Q2WGJ6 581 aa26.17■■□□□ 1.78
CPNE1-205ENST00000401607 ARHGEF2Q92974 986 aaKnown RBP26.17■■□□□ 1.78
CPNE1-205ENST00000401607 FATE1Q969F0 183 aa26.17■■□□□ 1.78
CPNE1-205ENST00000401607 TRIM56Q9BRZ2 755 aaKnown RBP26.17■■□□□ 1.78
CPNE1-205ENST00000401607 DHRS4Q9BTZ2 278 aa26.17■■□□□ 1.78
CPNE1-205ENST00000401607 HTATIP2Q9BUP3 242 aa26.17■■□□□ 1.78
CPNE1-205ENST00000401607 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.17■■□□□ 1.78
CPNE1-205ENST00000401607 ZFP37Q9Y6Q3 630 aaPredicted RBP26.17■■□□□ 1.78
CPNE1-205ENST00000401607 FOXO6A8MYZ6 492 aa26.16■■□□□ 1.78
CPNE1-205ENST00000401607 C5orf67F2Z3F1 127 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms