RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 POMGNT2Q8NAT1 580 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 PPP1R13LQ8WUF5 828 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 ZNF606Q8WXB4 792 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 KCNS3Q9BQ31 491 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 STRADBQ9C0K7 418 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 SLC32A1Q9H598 525 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 POLR1BQ9H9Y6 1135 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 CNGB3Q9NQW8 809 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 OR12D3Q9UGF7 316 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 POLG2Q9UHN1 485 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 CYP7B1O75881 506 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 VEGFBP49765 207 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 ALDH18A1P54886 795 aaKnown RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 PKN1Q16512 942 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 ZC3H12AQ5D1E8 599 aaKnown RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 KCNT1Q5JUK3 1230 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 ABHD15Q6UXT9 468 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 PIP4K2CQ8TBX8 421 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 NECTIN4Q96NY8 510 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 ADI1Q9BV57 179 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 GTPBP2Q9BX10 602 aaKnown RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 OSBPL1AQ9BXW6 950 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 SPATA6Q9NWH7 488 aaPredicted RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 SNX12Q9UMY4 172 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 MAN2B1O00754 1011 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 INPPL1O15357 1258 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 CDH16O75309 829 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 SUPT7LO94864 414 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 CPSF4O95639 269 aaKnown RBP8.09□□□□□ -1.12
USP47-203ENST00000399455 CORO1AP31146 461 aaKnown RBP8.09□□□□□ -1.12
USP47-203ENST00000399455 PTPN9P43378 593 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 NRIP1P48552 1158 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 FMR1Q06787 632 aaKnown RBP eCLIP8.09□□□□□ -1.121e-9■■■■■ 27.7
USP47-203ENST00000399455 NFIL3Q16649 462 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 ATP6AP1LQ52LC2 224 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 SH3D19Q5HYK7 790 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 MCEMP1Q8IX19 187 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 C3orf20Q8ND61 904 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 PPP1R14AQ96A00 147 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 ZBTB45Q96K62 511 aaPredicted RBP8.09□□□□□ -1.12
USP47-203ENST00000399455 ROPN1BQ9BZX4 212 aaPredicted RBP8.09□□□□□ -1.12
USP47-203ENST00000399455 ROPN1Q9HAT0 212 aaPredicted RBP8.09□□□□□ -1.12
USP47-203ENST00000399455 SAGE1Q9NXZ1 904 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 AURKCQ9UQB9 309 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 POLR1DQ9Y2S0 133 aa8.09□□□□□ -1.12
USP47-203ENST00000399455 EIF3HO15372 352 aaKnown RBP eCLIP8.08□□□□□ -1.12
USP47-203ENST00000399455 LAMTOR5O43504 91 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 ZNF500O60304 480 aaPredicted RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 HIST1H2ABP04908 130 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 GLI1P08151 1106 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 FDPSP14324 419 aaKnown RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 HTR7P34969 479 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 GTF2BQ00403 316 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 PDE1CQ14123 709 aaPredicted RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 LRIG3Q6UXM1 1119 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 LPCAT2Q7L5N7 544 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 DET1Q7L5Y6 550 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 HIST3H2AQ7L7L0 130 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 SLC22A17Q8WUG5 538 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 HIST1H2ACQ93077 130 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 BTN2A3PQ96KV6 586 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 DACH2Q96NX9 599 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 PARD6BQ9BYG5 372 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 RHBGQ9H310 441 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 RRAGDQ9NQL2 400 aaPredicted RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 HES2Q9Y543 173 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 NFAT5O94916 1531 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 GDI1P31150 447 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 GPD2P43304 727 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 DGKGP49619 791 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 BLVRAP53004 296 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 SLC16A1P53985 500 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 CYLC2Q14093 348 aaPredicted RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 GRB14Q14449 540 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 PDGFRLQ15198 375 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 STRADAQ7RTN6 431 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 MCOLN2Q8IZK6 566 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 FBXL16Q8N461 479 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 RIT1Q92963 219 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 TATDN2Q93075 761 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 MYO19Q96H55 970 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 NXF3Q9H4D5 531 aaKnown RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 NEK6Q9HC98 313 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 ZSCAN32Q9NX65 697 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 A8MX80 341 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 ISM1B1AKI9 464 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 TTPAP49638 278 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 NUMBP49757 651 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 PRKAA2P54646 552 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 POU6F1Q14863 301 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 TAF13Q15543 124 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 KYNUQ16719 465 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 INTS6LQ5JSJ4 861 aaKnown RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 LRRC8BQ6P9F7 803 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 RBM43Q6ZSC3 357 aaKnown RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 LUZP2Q86TE4 346 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 SLC13A5Q86YT5 568 aaPredicted RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 SLC38A3Q99624 504 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 RAD9AQ99638 391 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms