RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 NTAN1Q96AB6 310 aa17.97■□□□□ 0.47
SMIM11A-202ENST00000399295 TTC17Q96AE7 1141 aa17.97■□□□□ 0.47
SMIM11A-202ENST00000399295 ERLEC1Q96DZ1 483 aa17.97■□□□□ 0.47
SMIM11A-202ENST00000399295 OSBPL2Q9H1P3 480 aa17.97■□□□□ 0.47
SMIM11A-202ENST00000399295 OR12D3Q9UGF7 316 aa17.97■□□□□ 0.47
SMIM11A-202ENST00000399295 GRID2IPA4D2P6 1211 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 SYNCRIPO60506 623 aaKnown RBP17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 RPP40O75818 363 aaKnown RBP17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 URI1O94763 535 aaPredicted RBP17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 CNTN5O94779 1100 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 ASLP04424 464 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 PRLRP16471 622 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 SIM2Q14190 667 aaPredicted RBP17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 PTPRNQ16849 979 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 PLEKHG6Q3KR16 790 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 ALFQ53S48 1182 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 CXorf57Q6NSI4 855 aaKnown RBP17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 C11orf63Q6NUN7 778 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 KIAA1211LQ6NV74 962 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 CEP68Q76N32 757 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 C11orf74Q86VG3 221 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 APCDD1Q8J025 514 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 ZNF564Q8TBZ8 553 aaPredicted RBP17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 FNIP1Q8TF40 1166 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 GAB3Q8WWW8 586 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 NUP85Q9BW27 656 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 TPSD1Q9BZJ3 242 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 TRIM7Q9C029 511 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 CD248Q9HCU0 757 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 MPP6Q9NZW5 540 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 RAB23Q9ULC3 237 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 TBC1D30Q9Y2I9 924 aa17.96■□□□□ 0.47
SMIM11A-202ENST00000399295 SPAG17Q6Q759 2223 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 FANCGO15287 622 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 EPHX1P07099 455 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 GABRG2P18507 467 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 PRKCHP24723 683 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 MZF1P28698 734 aaPredicted RBP17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 PLK1P53350 603 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 ST8SIA6P61647 398 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 NRG1Q02297 640 aaPredicted RBP17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 SCAPQ12770 1279 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 USP39Q53GS9 565 aaKnown RBP17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 ARTNQ5T4W7 220 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 PRR23BQ6ZRT6 265 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 ASCL5Q7RTU5 278 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 DAAM2Q86T65 1068 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 LRRC57Q8N9N7 239 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 SUMF1Q8NBK3 374 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 FEM1AQ9BSK4 669 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 MAGEB5Q9BZ81 275 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 ZYG11BQ9C0D3 744 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 TMEM245Q9H330 911 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 L2HGDHQ9H9P8 463 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 OSGEPQ9NPF4 335 aa17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 PPARGC1AQ9UBK2 798 aaKnown RBP17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 EP300Q09472 2414 aaPredicted RBP17.95■□□□□ 0.46
SMIM11A-202ENST00000399295 OTOGLQ3ZCN5 2332 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 FAM72CH0Y354 149 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 RNF8O76064 485 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 HLA-EP13747 358 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 TCP1P17987 556 aaKnown RBP17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 CTSOP43234 321 aaPredicted RBP17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 NUMBP49757 651 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 AIF1P55008 147 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 ECT2LQ008S8 904 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 SULT2A1Q06520 285 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 ZNF252P-AS1Q0IIN9 211 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 EFHC2Q5JST6 749 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 MEI1Q5TIA1 1274 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 FAM72AQ5TYM5 149 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 RNF219Q5W0B1 726 aaPredicted RBP17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 FAM72DQ6L9T8 149 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 TFAP2DQ7Z6R9 452 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 SETD3Q86TU7 594 aaPredicted RBP17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 FAM72BQ86X60 149 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 OR52K2Q8NGK3 314 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 RUBCNQ92622 972 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 FZD10Q9ULW2 581 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 SMG5Q9UPR3 1016 aaKnown RBP17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 SAR1BQ9Y6B6 198 aa17.94■□□□□ 0.46
SMIM11A-202ENST00000399295 BUB1BO60566 1050 aaPredicted RBP17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 LRIG2O94898 1065 aa17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 ATP1A1P05023 1023 aaKnown RBP17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 RHOCP08134 193 aa17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 SRPRAP08240 638 aaKnown RBP17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 OR1E1P30953 314 aa17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 BYSLQ13895 437 aaKnown RBP17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 LPAL2Q16609 132 aa17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 C6orf118Q5T5N4 469 aa17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 MANEALQ5VSG8 457 aa17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 RWDD4Q6NW29 188 aaKnown RBP17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 PEX26Q7Z412 305 aa17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 ARFGAP1Q8N6T3 406 aa17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 ZNF366Q8N895 744 aa17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 KDM1BQ8NB78 822 aa17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 ALG14Q96F25 216 aa17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 LOXL4Q96JB6 756 aa17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 MRGPRX3Q96LB0 322 aa17.93■□□□□ 0.46
SMIM11A-202ENST00000399295 MRGPRX1Q96LB2 322 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms