RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 LIMK1P53667 647 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 ZNF33AQ06730 810 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 SFSWAPQ12872 951 aaKnown RBP14.97□□□□□ -0.01
SEC13-208ENST00000397109 SYCP2LQ5T4T6 812 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 ZNF776Q68DI1 518 aaPredicted RBP14.97□□□□□ -0.01
SEC13-208ENST00000397109 DNAJC24Q6P3W2 148 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 RABEPKQ7Z6M1 372 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 SETD3Q86TU7 594 aaPredicted RBP14.97□□□□□ -0.01
SEC13-208ENST00000397109 ZNF683Q8IZ20 524 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 MCOLN2Q8IZK6 566 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 JOSD2Q8TAC2 188 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 CENPIQ92674 756 aaPredicted RBP14.97□□□□□ -0.01
SEC13-208ENST00000397109 TOE1Q96GM8 510 aaKnown RBP14.97□□□□□ -0.01
SEC13-208ENST00000397109 ZNF419Q96HQ0 510 aaPredicted RBP14.97□□□□□ -0.01
SEC13-208ENST00000397109 FEM1AQ9BSK4 669 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 EVLQ9UI08 416 aaPredicted RBP14.97□□□□□ -0.01
SEC13-208ENST00000397109 SCML1Q9UN30 329 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 DMXL1Q9Y485 3027 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 MUC22E2RYF6 1773 aaPredicted RBP14.97□□□□□ -0.01
SEC13-208ENST00000397109 EDDM13A0A1B0GTR0 161 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 E9PAM4 449 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 I6L893 689 aaPredicted RBP14.96□□□□□ -0.01
SEC13-208ENST00000397109 SLC30A4O14863 429 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 DNTTP04053 509 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 SERPING1P05155 500 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 GPD1P21695 349 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 RFC1P35251 1148 aaPredicted RBP14.96□□□□□ -0.01
SEC13-208ENST00000397109 ADRA1BP35368 520 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 CTSOP43234 321 aaPredicted RBP14.96□□□□□ -0.01
SEC13-208ENST00000397109 KLHL30Q0D2K2 578 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 CDO1Q16878 200 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 C15orf59Q2T9L4 293 aaPredicted RBP14.96□□□□□ -0.01
SEC13-208ENST00000397109 TTC31Q49AM3 519 aaPredicted RBP14.96□□□□□ -0.01
SEC13-208ENST00000397109 WDR59Q6PJI9 974 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 ARMCX6Q7L4S7 300 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 ERMP1Q7Z2K6 904 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 C17orf53Q8N3J3 647 aaPredicted RBP14.96□□□□□ -0.01
SEC13-208ENST00000397109 CADM4Q8NFZ8 388 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 CEP76Q8TAP6 659 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 ALG14Q96F25 216 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 SMOC1Q9H4F8 434 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 RETREG1Q9H6L5 497 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 SLC25A13Q9UJS0 675 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 PILRBQ9UKJ0 227 aa14.96□□□□□ -0.01
SEC13-208ENST00000397109 GDF9O60383 454 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 CNTN5O94779 1100 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 RHOCP08134 193 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 GZMAP12544 262 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 ITPKAP23677 461 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 IRAK1P51617 712 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 RPS14P62263 151 aaKnown RBP14.95□□□□□ -0.02
SEC13-208ENST00000397109 KRT83P78385 493 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 NRG1Q02297 640 aaPredicted RBP14.95□□□□□ -0.02
SEC13-208ENST00000397109 ALFQ53S48 1182 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 WDR45BQ5MNZ6 344 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 C6orf118Q5T5N4 469 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 PEAR1Q5VY43 1037 aaPredicted RBP14.95□□□□□ -0.02
SEC13-208ENST00000397109 DGLUCYQ7Z3D6 616 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 DEFB119Q8N690 84 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 FAM172AQ8WUF8 416 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 RPL10LQ96L21 214 aaKnown RBP14.95□□□□□ -0.02
SEC13-208ENST00000397109 HSPA12BQ96MM6 686 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 NUSAP1Q9BXS6 441 aaKnown RBP14.95□□□□□ -0.02
SEC13-208ENST00000397109 MUC3BQ9H195 1237 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 OSBPL2Q9H1P3 480 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 PCED1AQ9H1Q7 454 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 RSPH9Q9H1X1 276 aaPredicted RBP14.95□□□□□ -0.02
SEC13-208ENST00000397109 HAUS4Q9H6D7 363 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 CD93Q9NPY3 652 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 ZNHIT6Q9NWK9 470 aaKnown RBP14.95□□□□□ -0.02
SEC13-208ENST00000397109 PPARGC1AQ9UBK2 798 aaKnown RBP14.95□□□□□ -0.02
SEC13-208ENST00000397109 SLCO3A1Q9UIG8 710 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 VPS28Q9UK41 221 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 OR51B4Q9Y5P0 310 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 SNX10Q9Y5X0 201 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 DOCK4Q8N1I0 1966 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 TCRBV5S1A1TA0A578 114 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 TTC34A8MYJ7 566 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 SRGAP2O75044 1071 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 SIN3BO75182 1162 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 GJB6O95452 261 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 CCDC175P0C221 793 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 ZNF143P52747 638 aaPredicted RBP14.95□□□□□ -0.02
SEC13-208ENST00000397109 HDAC4P56524 1084 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 FOXK2Q01167 660 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 DUOXA1Q1HG43 343 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 C9orf64Q5T6V5 341 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 DCUN1D2Q6PH85 259 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 ZNF783Q6ZMS7 281 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 ZNF571Q7Z3V5 609 aaPredicted RBP14.95□□□□□ -0.02
SEC13-208ENST00000397109 SLC41A1Q8IVJ1 513 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 KIF18AQ8NI77 898 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 NTAN1Q96AB6 310 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 CNPY3Q9BT09 278 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 C2orf49Q9BVC5 232 aaPredicted RBP14.95□□□□□ -0.02
SEC13-208ENST00000397109 GPR174Q9BXC1 333 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 ZYG11BQ9C0D3 744 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 TMPRSS4Q9NRS4 437 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 PARVAQ9NVD7 372 aa14.95□□□□□ -0.02
SEC13-208ENST00000397109 ARHGAP20Q9P2F6 1191 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms