RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 OR8D1Q8WZ84 308 aa15.44■□□□□ 0.06
SEC13-206ENST00000397102 SLC39A13Q96H72 371 aa15.44■□□□□ 0.06
SEC13-206ENST00000397102 APOLD1Q96LR9 279 aa15.44■□□□□ 0.06
SEC13-206ENST00000397102 USP29Q9HBJ7 922 aa15.44■□□□□ 0.06
SEC13-206ENST00000397102 EVA1BQ9NVM1 165 aa15.44■□□□□ 0.06
SEC13-206ENST00000397102 KIAA1257Q9ULG3 409 aa15.44■□□□□ 0.06
SEC13-206ENST00000397102 CA5BQ9Y2D0 317 aa15.44■□□□□ 0.06
SEC13-206ENST00000397102 SPTA1P02549 2419 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 K7ENP7 123 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 PIAS2O75928 621 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 RHOBTB3O94955 611 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 DUSP3P51452 185 aaPredicted RBP15.43■□□□□ 0.06
SEC13-206ENST00000397102 SKOR1P84550 965 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 SULT2A1Q06520 285 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 CNTN1Q12860 1018 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 POM121L1PQ3SYA9 428 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 PMF1Q6P1K2 205 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 INO80CQ6PI98 192 aaPredicted RBP15.43■□□□□ 0.06
SEC13-206ENST00000397102 LCLAT1Q6UWP7 414 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 LGI2Q8N0V4 545 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 DQX1Q8TE96 717 aaKnown RBP15.43■□□□□ 0.06
SEC13-206ENST00000397102 CLEC4CQ8WTT0 213 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 CCDC47Q96A33 483 aaKnown RBP15.43■□□□□ 0.06
SEC13-206ENST00000397102 ABCG4Q9H172 646 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 PREBQ9HCU5 417 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 NLGN3Q9NZ94 848 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 TJP2Q9UDY2 1190 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 SARDHQ9UL12 918 aa15.43■□□□□ 0.06
SEC13-206ENST00000397102 C1QTNF3-AMACRE9PGA6 284 aa15.42■□□□□ 0.06
SEC13-206ENST00000397102 PIK3R2O00459 728 aa15.42■□□□□ 0.06
SEC13-206ENST00000397102 FBXO21O94952 628 aa15.42■□□□□ 0.06
SEC13-206ENST00000397102 MOCS2O96007 188 aaPredicted RBP15.42■□□□□ 0.06
SEC13-206ENST00000397102 VASPP50552 380 aaPredicted RBP15.42■□□□□ 0.06
SEC13-206ENST00000397102 ISXQ2M1V0 245 aa15.42■□□□□ 0.06
SEC13-206ENST00000397102 ZCWPW2Q504Y3 356 aa15.42■□□□□ 0.06
SEC13-206ENST00000397102 GUF1Q8N442 669 aaKnown RBP15.42■□□□□ 0.06
SEC13-206ENST00000397102 UBR7Q8N806 425 aa15.42■□□□□ 0.06
SEC13-206ENST00000397102 CCDC97Q96F63 343 aaPredicted RBP15.42■□□□□ 0.06
SEC13-206ENST00000397102 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.42■□□□□ 0.06
SEC13-206ENST00000397102 USP25Q9UHP3 1055 aa15.42■□□□□ 0.06
SEC13-206ENST00000397102 SATB2Q9UPW6 733 aa15.42■□□□□ 0.06
SEC13-206ENST00000397102 MAPK8IP1Q9UQF2 711 aa15.42■□□□□ 0.06
SEC13-206ENST00000397102 COQ4Q9Y3A0 265 aa15.42■□□□□ 0.06
SEC13-206ENST00000397102 LY6G6EA0A0G2JKS1 128 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 NEMP2A6NFY4 417 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 ALOX15BO15296 676 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 FYNP06241 537 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 TACR2P21452 398 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 RBMS1P29558 406 aaKnown RBP15.41■□□□□ 0.06
SEC13-206ENST00000397102 CSRP3P50461 194 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 PLK1P53350 603 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 EDRF1Q3B7T1 1238 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 C3orf38Q5JPI3 329 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 KIAA1614Q5VZ46 1190 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 RAP1GAP2Q684P5 730 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 CHSY1Q86X52 802 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 MAPK15Q8TD08 544 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 TFAP2BQ92481 460 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 ERCC4Q92889 916 aaPredicted RBP15.41■□□□□ 0.06
SEC13-206ENST00000397102 GRAMD1AQ96CP6 724 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 IFT43Q96FT9 208 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 HSFY1Q96LI6 401 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 SLC46A1Q96NT5 459 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 MYOCQ99972 504 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 DUSP23Q9BVJ7 150 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 CALN1Q9BXU9 219 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 OSBPL2Q9H1P3 480 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 XPO7Q9UIA9 1087 aaKnown RBP15.41■□□□□ 0.06
SEC13-206ENST00000397102 PPM1HQ9ULR3 514 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 U3KQA8 63 aa15.41■□□□□ 0.06
SEC13-206ENST00000397102 M0QYV0 167 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 MCF2LO15068 1137 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 SCAMP1O15126 338 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 SLC31A1O15431 190 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 ATP9BO43861 1147 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 APOEP02649 317 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 PAEPP09466 180 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 EPB41P11171 864 aaKnown RBP15.4■□□□□ 0.06
SEC13-206ENST00000397102 MYF5P13349 255 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 PDGFRAP16234 1089 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 TBXAS1P24557 533 aaPredicted RBP15.4■□□□□ 0.06
SEC13-206ENST00000397102 TAS2R38P59533 333 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 NUCB2P80303 420 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 CNGA2Q16280 664 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 FOXD4L6Q3SYB3 417 aaPredicted RBP15.4■□□□□ 0.06
SEC13-206ENST00000397102 CBWD6Q4V339 395 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 CBWD3Q5JTY5 395 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 CBWD5Q5RIA9 395 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 FOXD4L5Q5VV16 416 aaPredicted RBP15.4■□□□□ 0.06
SEC13-206ENST00000397102 ATL3Q6DD88 541 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 NEK5Q6P3R8 708 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 FOXD4L3Q6VB84 417 aaPredicted RBP15.4■□□□□ 0.06
SEC13-206ENST00000397102 CCDC81Q6ZN84 652 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 PRICKLE2Q7Z3G6 844 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 TAC4Q86UU9 113 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 CCAR2Q8N163 923 aaKnown RBP15.4■□□□□ 0.06
SEC13-206ENST00000397102 OR13H1Q8NG92 308 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 IFI44Q8TCB0 444 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 FOXD4L4Q8WXT5 416 aaPredicted RBP15.4■□□□□ 0.06
SEC13-206ENST00000397102 MIS12Q9H081 205 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms