RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 CXCR3P49682 368 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 RENBPP51606 427 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 MGAT5Q09328 741 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 RTP2Q5QGT7 225 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 IGDCC3Q8IVU1 814 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 EBNA1BP2Q99848 306 aaKnown RBP15.51■□□□□ 0.07
MCF2L-205ENST00000397017 EFR3BQ9Y2G0 817 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 GRIN2DO15399 1336 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 COL11A1P12107 1806 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-205ENST00000397017 BAG2O95816 211 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 CYBBP04839 570 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 MAP2K2P36507 400 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 CASP2P42575 452 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 MMP13P45452 471 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 GABRB2P47870 512 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 PPP1R15BQ5SWA1 713 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 TRIM67Q6ZTA4 783 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 TRPM8Q7Z2W7 1104 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 TNS4Q8IZW8 715 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 RIBC1Q8N443 379 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-205ENST00000397017 ZNF784Q8NCA9 323 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-205ENST00000397017 DIS3LQ8TF46 1054 aaKnown RBP15.51■□□□□ 0.07
MCF2L-205ENST00000397017 NPY6RQ99463 290 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 ZYG11BQ9C0D3 744 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 ECT2Q9H8V3 914 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 UTP6Q9NYH9 597 aaKnown RBP15.51■□□□□ 0.07
MCF2L-205ENST00000397017 NCF1BA6NI72 391 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-205ENST00000397017 NCF1CA8MVU1 366 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-205ENST00000397017 NCF1P14598 390 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-205ENST00000397017 ITGB6P18564 788 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 GALNT3Q14435 633 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 MAP7D1Q3KQU3 841 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 N4BP2L1Q5TBK1 243 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-205ENST00000397017 TRIM42Q8IWZ5 723 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 ZMIZ2Q8NF64 920 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 NDNQ99608 321 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 ACSS3Q9H6R3 686 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 ARL2BPQ9Y2Y0 163 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 ZNF623O75123 536 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 RHOAP61586 193 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 SEMG2Q02383 582 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 RABGAP1LQ5R372 815 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 VSTM1Q6UX27 236 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 SPPL2BQ8TCT7 592 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 GANCQ8TET4 914 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 RMDN2Q96LZ7 410 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 BPIFA1Q9NP55 256 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 DNMT3LQ9UJW3 386 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 FOCADQ5VW36 1801 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 CSHL1Q14406 222 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 TEX44Q53QW1 395 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 KLC3Q6P597 504 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 SPATS2Q86XZ4 545 aaKnown RBP15.5■□□□□ 0.07
MCF2L-205ENST00000397017 ARL14EPQ8N8R7 260 aaPredicted RBP15.5■□□□□ 0.07
MCF2L-205ENST00000397017 OLIG1Q8TAK6 271 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 PSMG2Q969U7 264 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 SLC39A8Q9C0K1 460 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 OR6C75A6NL08 312 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 NDUFS3O75489 264 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 ENO1P06733 434 aaKnown RBP15.5■□□□□ 0.07
MCF2L-205ENST00000397017 TARSP26639 723 aaKnown RBP15.5■□□□□ 0.07
MCF2L-205ENST00000397017 PGGT1BP53609 377 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 USP46P62068 366 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 SKOR1P84550 965 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 ITGA9Q13797 1035 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 SLC1A5Q15758 541 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 PPM1JQ5JR12 505 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 C14orf80Q86SX3 495 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 LINC00523Q86TU6 105 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 PNPLA1Q8N8W4 532 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 TMEM174Q8WUU8 243 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 FRMD8Q9BZ67 464 aaPredicted RBP15.5■□□□□ 0.07
MCF2L-205ENST00000397017 UXTQ9UBK9 157 aaPredicted RBP15.5■□□□□ 0.07
MCF2L-205ENST00000397017 GRID1Q9ULK0 1009 aa15.5■□□□□ 0.07
MCF2L-205ENST00000397017 HACD1B0YJ81 288 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 IRAK2O43187 625 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 GALTP07902 379 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 GTF2A1P52655 376 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-205ENST00000397017 TIGD7Q6NT04 549 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-205ENST00000397017 PAQR9Q6ZVX9 377 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 GSTCDQ8NEC7 633 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 CCDC124Q96CT7 223 aaKnown RBP15.49■□□□□ 0.07
MCF2L-205ENST00000397017 RUVBL2Q9Y230 463 aaKnown RBP15.49■□□□□ 0.07
MCF2L-205ENST00000397017 GREB1LQ9C091 1923 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-205ENST00000397017 GOLGA8QA0A0J9YX86 632 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 GOLGA8OA6NCC3 632 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 GOLGA8NF8WBI6 632 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 TPP1O14773 563 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 STX7O15400 261 aaKnown RBP15.49■□□□□ 0.07
MCF2L-205ENST00000397017 TLL1O43897 1013 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 CNTN5O94779 1100 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 HAUS5O94927 633 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 STAU1O95793 577 aaKnown RBP15.49■□□□□ 0.07
MCF2L-205ENST00000397017 GFAPP14136 432 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 CHRM3P20309 590 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 PTPN3P26045 913 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 SERPINB9P50453 376 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 DSC2Q02487 901 aa15.49■□□□□ 0.07
MCF2L-205ENST00000397017 ACTN3Q08043 901 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-205ENST00000397017 TRABD2AQ86V40 505 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms