RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 TMA16Q96EY4 203 aaKnown RBP10.87□□□□□ -0.67
NUP98-205ENST00000397007 C2orf42Q9NWW7 574 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 RNF103O00237 685 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 SCAMP3O14828 347 aaKnown RBP10.87□□□□□ -0.67
NUP98-205ENST00000397007 PDGFBP01127 241 aaPredicted RBP10.87□□□□□ -0.67
NUP98-205ENST00000397007 CSNK1DP48730 415 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 PPIDQ08752 370 aaKnown RBP10.87□□□□□ -0.67
NUP98-205ENST00000397007 SLC14A2Q15849 920 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 TFDP3Q5H9I0 405 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 AADACL2Q6P093 401 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 EP400NLQ6ZTU2 488 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 IL17RCQ8NAC3 791 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 BBS2Q9BXC9 721 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 SLC39A8Q9C0K1 460 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 EPHX3Q9H6B9 360 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 PCSK1NQ9UHG2 260 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 GOLGA6L9A6NEM1 432 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 MFSD11O43934 449 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 KAT7O95251 611 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 CSKP41240 450 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 MRPS21P82921 87 aaKnown RBP10.87□□□□□ -0.67
NUP98-205ENST00000397007 CAMK2GQ13555 558 aaPredicted RBP10.87□□□□□ -0.67
NUP98-205ENST00000397007 OASLQ15646 514 aaKnown RBP10.87□□□□□ -0.67
NUP98-205ENST00000397007 DAAM2Q86T65 1068 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 KIAA1522Q9P206 1035 aaPredicted RBP10.87□□□□□ -0.67
NUP98-205ENST00000397007 LHX3Q9UBR4 397 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 SLC12A6Q9UHW9 1150 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 ATP8A1Q9Y2Q0 1164 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 JRKLQ9Y4A0 524 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 TMEM221A6NGB7 291 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 M0R296 226 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 PABPC1P11940 636 aaKnown RBP10.86□□□□□ -0.67
NUP98-205ENST00000397007 TGM2P21980 687 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 IFI35P80217 286 aaPredicted RBP10.86□□□□□ -0.67
NUP98-205ENST00000397007 GNA12Q03113 381 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 IFI16Q16666 785 aaKnown RBP10.86□□□□□ -0.67
NUP98-205ENST00000397007 CHSY1Q86X52 802 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 PGBD5Q8N414 524 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 LZTR1Q8N653 840 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 TMEM105Q8N8V8 129 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 FAM3CQ92520 227 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 IL12RB2Q99665 862 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 CEP44Q9C0F1 390 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 TCRBV7S2A1N4TA0A589 114 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 ZSCAN12O43309 604 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 TIMM44O43615 452 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 PI15O43692 258 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 CTSOP43234 321 aaPredicted RBP10.86□□□□□ -0.67
NUP98-205ENST00000397007 DGKGP49619 791 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 OXCT1P55809 520 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 NOMO1Q15155 1222 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 HADHQ16836 314 aaKnown RBP10.86□□□□□ -0.67
NUP98-205ENST00000397007 INO80DQ53TQ3 878 aaPredicted RBP10.86□□□□□ -0.67
NUP98-205ENST00000397007 DGKKQ5KSL6 1271 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 ARHGAP36Q6ZRI8 547 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 TPRG1Q6ZUI0 275 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 SH2D3CQ8N5H7 860 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 ZNF599Q96NL3 588 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 EPAS1Q99814 870 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 DNAH14Q0VDD8 3507 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 COL27A1Q8IZC6 1860 aaPredicted RBP10.86□□□□□ -0.67
NUP98-205ENST00000397007 EEF2KO00418 725 aaKnown RBP10.86□□□□□ -0.67
NUP98-205ENST00000397007 ATP1A1P05023 1023 aaKnown RBP10.86□□□□□ -0.67
NUP98-205ENST00000397007 PECAM1P16284 738 aaPredicted RBP10.86□□□□□ -0.67
NUP98-205ENST00000397007 GLDCP23378 1020 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 ACVRL1P37023 503 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 CLCN6P51797 869 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 XRCC4Q13426 336 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 PON2Q15165 354 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 KIAA1328Q86T90 577 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 CREG2Q8IUH2 290 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 LRRC49Q8IUZ0 686 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 ACTRT1Q8TDG2 376 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 TBC1D17Q9HA65 648 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 USP29Q9HBJ7 922 aa10.86□□□□□ -0.67
NUP98-205ENST00000397007 MACROD2A1Z1Q3 448 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 TSPAN3O60637 253 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 MMP2P08253 660 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 AMPD1P23109 780 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 CYTH1Q15438 398 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 FBXO43Q4G163 708 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 ZNF852Q6ZMS4 543 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 TPGS1Q6ZTW0 290 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 PTPRN2Q92932 1015 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 ACDQ96AP0 544 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 HMCESQ96FZ2 354 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 CATSPERBQ9H7T0 1116 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 ZWILCHQ9H900 591 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 VPS51Q9UID3 782 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 SNX12Q9UMY4 172 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 PACSIN2Q9UNF0 486 aaPredicted RBP10.85□□□□□ -0.67
NUP98-205ENST00000397007 FTCDO95954 541 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 MOCS2O96007 188 aaPredicted RBP10.85□□□□□ -0.67
NUP98-205ENST00000397007 ALADP13716 330 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 VAV1P15498 845 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 COL9A1P20849 921 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 GARSP41250 739 aaKnown RBP10.85□□□□□ -0.67
NUP98-205ENST00000397007 NR2C2P49116 596 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 MSLNQ13421 630 aaPredicted RBP10.85□□□□□ -0.67
NUP98-205ENST00000397007 C6orf118Q5T5N4 469 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms