RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 TRIM65Q6PJ69 517 aa16.79■□□□□ 0.28
CLTA-203ENST00000396603 LAYNQ6UX15 382 aa16.79■□□□□ 0.28
CLTA-203ENST00000396603 APCDD1Q8J025 514 aa16.79■□□□□ 0.28
CLTA-203ENST00000396603 MFSD2AQ8NA29 543 aa16.79■□□□□ 0.28
CLTA-203ENST00000396603 FRS2Q8WU20 508 aa16.79■□□□□ 0.28
CLTA-203ENST00000396603 EBF2Q9HAK2 575 aa16.79■□□□□ 0.28
CLTA-203ENST00000396603 AASDHPPTQ9NRN7 309 aa16.79■□□□□ 0.28
CLTA-203ENST00000396603 RRN3Q9NYV6 651 aa16.79■□□□□ 0.28
CLTA-203ENST00000396603 CYTH4Q9UIA0 394 aa16.79■□□□□ 0.28
CLTA-203ENST00000396603 A0A087WV48 116 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 TRABD2BA6NFA1 517 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 TLR4O00206 839 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 ATP9BO43861 1147 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 CALCAP01258 141 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 IL1BP01584 269 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 WNT1P04628 370 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 ITGAVP06756 1048 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 EEF1GP26641 437 aaKnown RBP16.78■□□□□ 0.28
CLTA-203ENST00000396603 DRD3P35462 400 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 NXPH1P58417 271 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 NFKBIBQ15653 356 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 C5orf22Q49AR2 442 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 PRPF39Q86UA1 669 aaKnown RBP16.78■□□□□ 0.28
CLTA-203ENST00000396603 PDZD3Q86UT5 571 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 TRIM69Q86WT6 500 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 CACTIN-AS1Q8N1I8 211 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 STK40Q8N2I9 435 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 OR14C36Q8NHC7 312 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 OR8D1Q8WZ84 308 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 SERAC1Q96JX3 654 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 RPL10LQ96L21 214 aaKnown RBP16.78■□□□□ 0.28
CLTA-203ENST00000396603 FAM204AQ9H8W3 233 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 APEX2Q9UBZ4 518 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 SLC25A13Q9UJS0 675 aa16.78■□□□□ 0.28
CLTA-203ENST00000396603 SMTNL1A8MU46 457 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 C1QTNF3-AMACRE9PGA6 284 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 KCNK3O14649 394 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 ENC1O14682 589 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 PLRG1O43660 514 aaKnown RBP16.77■□□□□ 0.28
CLTA-203ENST00000396603 RNGTTO60942 597 aaKnown RBP16.77■□□□□ 0.28
CLTA-203ENST00000396603 CLDN11O75508 207 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 RFPL3O75679 317 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 LDOC1O95751 146 aaPredicted RBP16.77■□□□□ 0.28
CLTA-203ENST00000396603 PDGFRAP16234 1089 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 CCDC15Q0P6D6 951 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 COL9A2Q14055 689 aaPredicted RBP16.77■□□□□ 0.28
CLTA-203ENST00000396603 SHBQ15464 509 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 MAN2A1Q16706 1144 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 SFMBT2Q5VUG0 894 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 CXorf57Q6NSI4 855 aaKnown RBP16.77■□□□□ 0.28
CLTA-203ENST00000396603 ZDHHC17Q8IUH5 632 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 ZNF397Q8NF99 534 aaPredicted RBP16.77■□□□□ 0.28
CLTA-203ENST00000396603 SHC3Q92529 594 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 NXPE2Q96DL1 559 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 CNDP2Q96KP4 475 aaKnown RBP16.77■□□□□ 0.28
CLTA-203ENST00000396603 PPP1R13BQ96KQ4 1090 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 BPIFA3Q9BQP9 254 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 DDIT4Q9NX09 232 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 TBC1D30Q9Y2I9 924 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 RAXQ9Y2V3 346 aa16.77■□□□□ 0.28
CLTA-203ENST00000396603 TMEM131Q92545 1883 aa16.77■□□□□ 0.27
CLTA-203ENST00000396603 ADAMTS20P59510 1910 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 PLXNA2O75051 1894 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 TBC1D3DA0A087WVF3 549 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 TBC1D3IA0A087WXS9 549 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 TBC1D3EA0A087X179 549 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 TBC1D3KA0A087X1G2 549 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 SYCE3A1L190 88 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 TBC1D3FA6NER0 549 aaPredicted RBP16.76■□□□□ 0.27
CLTA-203ENST00000396603 GOLGA8CPA6NN73 597 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 TBC1D3LB9A6J9 549 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 MCF2LO15068 1137 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 TBC1D3HP0C7X1 549 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 HOXB3P14651 431 aaPredicted RBP16.76■□□□□ 0.27
CLTA-203ENST00000396603 STK19P49842 368 aaPredicted RBP16.76■□□□□ 0.27
CLTA-203ENST00000396603 COL28A1Q2UY09 1125 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 ANO6Q4KMQ2 910 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 TBC1D3GQ6DHY5 549 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 TBC1D3CQ6IPX1 549 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 FBXL22Q6P050 247 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 NEK5Q6P3R8 708 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 DHRS13Q6UX07 377 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 GBP6Q6ZN66 633 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 C11orf57Q6ZUT1 292 aaPredicted RBP16.76■□□□□ 0.27
CLTA-203ENST00000396603 SLC26A9Q7LBE3 791 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 TBC1D3Q8IZP1 549 aaPredicted RBP16.76■□□□□ 0.27
CLTA-203ENST00000396603 DEFB106AQ8N104 65 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 C1orf131Q8NDD1 294 aaKnown RBP16.76■□□□□ 0.27
CLTA-203ENST00000396603 TSC1Q92574 1164 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 ALG14Q96F25 216 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 RPRD1AQ96P16 312 aaPredicted RBP16.76■□□□□ 0.27
CLTA-203ENST00000396603 FEM1AQ9BSK4 669 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 PREBQ9HCU5 417 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 ARHGAP20Q9P2F6 1191 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 PPM1HQ9ULR3 514 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 HS3ST2Q9Y278 367 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 PAXBP1Q9Y5B6 917 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 CABIN1Q9Y6J0 2220 aa16.76■□□□□ 0.27
CLTA-203ENST00000396603 NYNRINQ9P2P1 1898 aaKnown RBP16.76■□□□□ 0.27
CLTA-203ENST00000396603 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms