RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 COX16Q9P0S2 106 aa16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 KLHL8Q9P2G9 620 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 A0A088AWK7 358 aa16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 FAM163BP0C2L3 166 aa16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 RALBP11234 206 aa16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 SPRP35270 261 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 ADRA1BP35368 520 aa16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 SERPINB8P50452 374 aa16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 LIMK2P53671 638 aa16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 AP2B1P63010 937 aa16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 MAP2K5Q13163 448 aa16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 SEMA3BQ13214 749 aa16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 C1orf146Q5VVC0 180 aa16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 TP53INP2Q8IXH6 220 aa16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 DCLK2Q8N568 766 aa16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 PNPOQ9NVS9 261 aa16.34■□□□□ 0.21
CCHCR1-202ENST00000396263 KCNK1O00180 336 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 NCAM2O15394 837 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 USP1O94782 785 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 ERCC2P18074 760 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 LRPAP1P30533 357 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 LRRC23Q53EV4 343 aaPredicted RBP16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 TMCO4Q5TGY1 634 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 HFE2Q6ZVN8 426 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 RNF169Q8NCN4 708 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 DNAJB3Q8WWF6 145 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 PPP1R12CQ9BZL4 782 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 CASS4Q9NQ75 786 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 VANGL2Q9ULK5 521 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 ERI2A8K979 691 aaKnown RBP16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 C9IYK1 514 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 FAM72CH0Y354 149 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 GABRDO14764 452 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 FBXO21O94952 628 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 FYNP06241 537 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 CPA3P15088 417 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 HCAR3P49019 387 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 TKTL1P51854 596 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 COPAP53621 1224 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 GJA9P57773 515 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 ADAM17P78536 824 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 PPIDQ08752 370 aaKnown RBP16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 PRAMEF19Q5SWL8 479 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 FAM72AQ5TYM5 149 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 KCTD11Q693B1 232 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 FAM72DQ6L9T8 149 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 CMC1Q7Z7K0 106 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 FAM72BQ86X60 149 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 ZNF669Q96BR6 464 aaPredicted RBP16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 TRAPPC9Q96Q05 1148 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 WDR6Q9NNW5 1121 aaKnown RBP16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 BFARQ9NZS9 450 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 IPPQ9Y573 584 aa16.33■□□□□ 0.2
CCHCR1-202ENST00000396263 BRCA2P51587 3418 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 ZCWPW2A0A1B0GU75 182 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 TMEM88BA6NKF7 163 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 MEI4A8MW99 385 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 FKBP6O75344 327 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 ACAT1P24752 427 aaKnown RBP16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 CTGFP29279 349 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 SREBF2Q12772 1141 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 OLIG2Q13516 323 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 ITGA9Q13797 1035 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 HIC1Q14526 733 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 CCL14Q16627 93 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 STRA8Q7Z7C7 330 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 KBTBD2Q8IY47 623 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 BRD8Q9H0E9 1235 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 ZFYVE28Q9HCC9 887 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 CHCHD3Q9NX63 227 aaKnown RBP16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 SCOCQ9UIL1 159 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 PCDHB12Q9Y5F1 795 aa16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 TRIP12Q14669 1992 aaPredicted RBP16.32■□□□□ 0.2
CCHCR1-202ENST00000396263 NRP1O14786 923 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 CCNT2O60583 730 aaKnown RBP16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 MPOP05164 745 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 INTS6LQ5JSJ4 861 aaKnown RBP16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 AAGABQ6PD74 315 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 CLEC14AQ86T13 490 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 ARRDC4Q8NCT1 418 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 SMG8Q8ND04 991 aaKnown RBP16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 SLC7A14Q8TBB6 771 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 PPP1R13LQ8WUF5 828 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 ZNF358Q9NW07 568 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 FAM200BP0CF97 657 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 CYP2B6P20813 491 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 MAP3K7CLP57077 242 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 DAOAP59103 153 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 TPI1P60174 286 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 SLC25A3Q00325 362 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 BTKQ06187 659 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 SMAD1Q15797 465 aaKnown RBP16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 ANKRD20A4Q4UJ75 823 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 WSCD1Q658N2 575 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 PDPK2PQ6A1A2 396 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 FSTL4Q6MZW2 842 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 ADGRG6Q86SQ4 1221 aa16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 PLD6Q8N2A8 252 aaKnown RBP16.31■□□□□ 0.2
CCHCR1-202ENST00000396263 PGAP3Q96FM1 320 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms