RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 SGIP1Q9BQI5 828 aa6.69□□□□□ -1.34
BDNF-203ENST00000395978 GPAMQ9HCL2 828 aa6.69□□□□□ -1.34
BDNF-203ENST00000395978 SPATS2LQ9NUQ6 558 aaKnown RBP6.69□□□□□ -1.34
BDNF-203ENST00000395978 ANKRD6Q9Y2G4 727 aa6.69□□□□□ -1.34
BDNF-203ENST00000395978 SLC45A1Q9Y2W3 748 aa6.69□□□□□ -1.34
BDNF-203ENST00000395978 TEX264Q9Y6I9 313 aa6.69□□□□□ -1.34
BDNF-203ENST00000395978 HEATR9A2RTY3 570 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 MYBPHLA2RUH7 354 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 UNCXA6NJT0 531 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 F5H5T6 163 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 DCXO43602 365 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 RAMP2O60895 175 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 SKAP2O75563 359 aaPredicted RBP6.68□□□□□ -1.34
BDNF-203ENST00000395978 ALDH2P05091 517 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 BRCC3P46736 316 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 NAGLUP54802 743 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 KCNJ11Q14654 390 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 PPP1R15BQ5SWA1 713 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 SLC9A4Q6AI14 798 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 TMEM154Q6P9G4 183 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 LRRC49Q8IUZ0 686 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 DEFB107AQ8IZN7 70 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 EFHBQ8N7U6 833 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 ZNF513Q8N8E2 541 aaPredicted RBP6.68□□□□□ -1.34
BDNF-203ENST00000395978 CATSPER1Q8NEC5 780 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 PGLYRP2Q96PD5 576 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 CYP4F12Q9HCS2 524 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 VCX3AQ9NNX9 186 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 SNX15Q9NRS6 342 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 ARL8BQ9NVJ2 186 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 CNTN3Q9P232 1028 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 FARP1Q9Y4F1 1045 aaPredicted RBP6.68□□□□□ -1.34
BDNF-203ENST00000395978 DUSP11O75319 330 aaKnown RBP6.68□□□□□ -1.34
BDNF-203ENST00000395978 XPAP23025 273 aaPredicted RBP6.68□□□□□ -1.34
BDNF-203ENST00000395978 YWHAQP27348 245 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 DAOAP59103 153 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 TUSC3Q13454 348 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 CYLC2Q14093 348 aaPredicted RBP6.68□□□□□ -1.34
BDNF-203ENST00000395978 FLOT2Q14254 428 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 INSCQ1MX18 579 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 INTS6LQ5JSJ4 861 aaKnown RBP6.68□□□□□ -1.34
BDNF-203ENST00000395978 TMEM63BQ5T3F8 832 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 UBAP2Q5T6F2 1119 aaKnown RBP6.68□□□□□ -1.34
BDNF-203ENST00000395978 DCLRE1AQ6PJP8 1040 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 PTAR1Q7Z6K3 402 aaPredicted RBP6.68□□□□□ -1.34
BDNF-203ENST00000395978 ZNF567Q8N184 647 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 PQLC3Q8N755 202 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 PCYOX1LQ8NBM8 494 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 FAM13CQ8NE31 585 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 UROC1Q96N76 676 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 NMUR2Q9GZQ4 415 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 GDAP2Q9NXN4 497 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 VTI1BQ9UEU0 232 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 FZD10Q9ULW2 581 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 F2P00734 622 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 KCNE1P15382 129 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 ELAVL2Q12926 359 aaKnown RBP6.68□□□□□ -1.34
BDNF-203ENST00000395978 CNGA3Q16281 694 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 BRMS1LQ5PSV4 323 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 CERCAMQ5T4B2 595 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 FAM171A1Q5VUB5 890 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 LRRC8EQ6NSJ5 796 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 TMC7Q7Z402 723 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 CMC1Q7Z7K0 106 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 JADE3Q92613 823 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 SDCCAG3Q96C92 435 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 PCED1BQ96HM7 432 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 PIWIL1Q96J94 861 aaKnown RBP6.68□□□□□ -1.34
BDNF-203ENST00000395978 ZMAT2Q96NC0 199 aaKnown RBP6.68□□□□□ -1.34
BDNF-203ENST00000395978 ZBTB18Q99592 522 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 ARHGEF3Q9NR81 526 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 TLR8Q9NR97 1041 aaKnown RBP6.68□□□□□ -1.34
BDNF-203ENST00000395978 DLGAP2Q9P1A6 1054 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 THEGQ9P2T0 379 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 MRPL42Q9Y6G3 142 aaKnown RBP6.68□□□□□ -1.34
BDNF-203ENST00000395978 SLC30A1Q9Y6M5 507 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 ECM29Q5VYK3 1845 aa6.68□□□□□ -1.34
BDNF-203ENST00000395978 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.67□□□□□ -1.34
BDNF-203ENST00000395978 YJEFN3A6XGL0 299 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 E7ESA3 106 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 H7C4K7 107 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 ANGPT2O15123 496 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 ZBTB24O43167 697 aaPredicted RBP6.67□□□□□ -1.34
BDNF-203ENST00000395978 CNMDO75829 334 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 RHOBTB1O94844 696 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 UPP2O95045 317 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 PIGNO95427 931 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 AP2A1O95782 977 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 C2P06681 752 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 SERPINA6P08185 405 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 FAM163BP0C2L3 166 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 IQCF3P0C7M6 154 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 CSH1P0DML2 217 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 CSH2P0DML3 217 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 CLCNKBP51801 687 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 KPNA1P52294 538 aaPredicted RBP6.67□□□□□ -1.34
BDNF-203ENST00000395978 GRIK3Q13003 919 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 ZNF177Q13360 481 aaPredicted RBP6.67□□□□□ -1.34
BDNF-203ENST00000395978 GRB14Q14449 540 aa6.67□□□□□ -1.34
BDNF-203ENST00000395978 HABP4Q5JVS0 413 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms