RNA–Protein interactions for RNA: ENST00000394828.6

PPP3CB-203, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-203ENST00000394828 DNAJA2O60884 412 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 TCEA3O75764 348 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 THP07101 528 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 CCDC130P13994 396 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 GNL1P36915 607 aaPredicted RBP12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 TXNRD3NBQ6F5E7 133 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 PMF1Q6P1K2 205 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 HPS6Q86YV9 775 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 ADGRF2Q8IZF7 708 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 NIPA2Q8N8Q9 360 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 ICA1LQ8NDH6 482 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 RAB3IL1Q8TBN0 382 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 NDEL1Q9GZM8 345 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 STARD7Q9NQZ5 370 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 RRN3Q9NYV6 651 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 NOX1Q9Y5S8 564 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 J3QRK9 145 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 MAGEC1O60732 1142 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 HNRNPCL1O60812 293 aaKnown RBP12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 FDFT1P37268 417 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 PRMT2P55345 433 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 TAP1Q03518 808 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 ATP13A4Q4VNC1 1196 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 SYCP2LQ5T4T6 812 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 TRNP1Q6NT89 227 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 DCUN1D2Q6PH85 259 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 RTN4RL1Q86UN2 441 aaPredicted RBP12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 CRYBG2Q8N1P7 616 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 EMC1Q8N766 993 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 HSPH1Q92598 858 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 CASP10Q92851 521 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 FBXL8Q96CD0 374 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 UNC93B1Q9H1C4 597 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 LRRC19Q9H756 370 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 C10orf88Q9H8K7 445 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 HESX1Q9UBX0 185 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 ACTL7BQ9Y614 415 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 SRGAP2BP0DMP2 458 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 THRAP10827 490 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 KRT3P12035 628 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 CD1EP15812 388 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 WARSP23381 471 aaKnown RBP12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 ARHGAP17Q68EM7 881 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 XKR5Q6UX68 686 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 DENND5BQ6ZUT9 1274 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 GSTA5Q7RTV2 222 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 ARID3BQ8IVW6 561 aaPredicted RBP12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 RHOT1Q8IXI2 618 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 KATNAL2Q8IYT4 538 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 TOP6BLQ8N6T0 577 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 USP33Q8TEY7 942 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 SLC35F5Q8WV83 523 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 LINC01599Q8WXQ3 324 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 TTC25Q96NG3 672 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 PAIP1Q9H074 479 aaKnown RBP12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 TPK1Q9H3S4 243 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 SLC38A7Q9NVC3 462 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 ZDHHC7Q9NXF8 308 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 TMED5Q9Y3A6 229 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 CAPN14A8MX76 684 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 NDC80O14777 642 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 CRTAMO95727 393 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 TKTP29401 623 aaKnown RBP12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 RGS7P49802 495 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 CDH15P55291 814 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 SH3BGRP55822 239 aaPredicted RBP12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 CDKL1Q00532 357 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 KRT81Q14533 505 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 STILQ15468 1287 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 OASLQ15646 514 aaKnown RBP12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 TMCO4Q5TGY1 634 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 KIAA0319Q5VV43 1072 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 POTEHQ6S545 545 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 FAM183BPQ6ZVS7 135 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 ZNF598Q86UK7 904 aaKnown RBP12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 HACE1Q8IYU2 909 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 DCUN1D1Q96GG9 259 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 EPB41L1Q9H4G0 881 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 EBF1Q9UH73 591 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 DTNAQ9Y4J8 743 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 SQORQ9Y6N5 450 aa12.11□□□□□ -0.47
PPP3CB-203ENST00000394828 CASTOR2A6NHX0 329 aa12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 SPECC1L-ADORA2AF8WAN1 911 aa12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 ARVCFO00192 962 aa12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 CYB561D2O14569 222 aa12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 FSCN2O14926 492 aa12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 HUS1O60921 280 aa12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 YWHAGP61981 247 aaKnown RBP eCLIP12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 TSPY1Q01534 308 aa12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 CLUL1Q15846 466 aa12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 UPP1Q16831 310 aa12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 EFHC1Q5JVL4 640 aa12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 WSCD1Q658N2 575 aa12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 SNX25Q9H3E2 840 aa12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 RSAD1Q9HA92 442 aa12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 SIAEQ9HAT2 523 aa12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 SMG5Q9UPR3 1016 aaKnown RBP12.1□□□□□ -0.47
PPP3CB-203ENST00000394828 GABRDO14764 452 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms