RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PSME2Q9UL46 239 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 MFHAS1Q9Y4C4 1052 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 H0YJX3 145 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 TMPRSS11AQ6ZMR5 421 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 RBM44Q6ZP01 1051 aaKnown RBP13.62□□□□□ -0.23
USP49-203ENST00000394253 OR52K2Q8NGK3 314 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 EAF2Q96CJ1 260 aaPredicted RBP13.62□□□□□ -0.23
USP49-203ENST00000394253 SGTAO43765 313 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 IFNGP01579 166 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 SSTR3P32745 418 aaPredicted RBP13.62□□□□□ -0.23
USP49-203ENST00000394253 GLRBP48167 497 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 PAPD7Q5XG87 772 aaKnown RBP13.62□□□□□ -0.23
USP49-203ENST00000394253 ZNF567Q8N184 647 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 UCMAQ8WVF2 138 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 PIH1D2Q8WWB5 315 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 KCNN2Q9H2S1 579 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 RHOBTB3O94955 611 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 CACNB2Q08289 660 aaPredicted RBP13.62□□□□□ -0.23
USP49-203ENST00000394253 TCEA2Q15560 299 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 ZNHIT3Q15649 155 aaPredicted RBP13.62□□□□□ -0.23
USP49-203ENST00000394253 ZNF549Q6P9A3 640 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 ANKS1AQ92625 1134 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 TMBIM4Q9HC24 238 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.62□□□□□ -0.234e-13■■■■■ 46.9
USP49-203ENST00000394253 CCDC167Q9P0B6 97 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 PCDHA6Q9UN73 950 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 PCDHA8Q9Y5H6 950 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 CASKO14936 926 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 SLC2A4P14672 509 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 AFF1P51825 1210 aaKnown RBP13.62□□□□□ -0.23
USP49-203ENST00000394253 UGT2B15P54855 530 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 SNRNP35Q16560 246 aaKnown RBP13.62□□□□□ -0.23
USP49-203ENST00000394253 FRMD7Q6ZUT3 714 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 SPATA33Q96N06 139 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 QRFPRQ96P65 431 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 TNRQ92752 1358 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 RGS8P57771 180 aaPredicted RBP13.62□□□□□ -0.23
USP49-203ENST00000394253 EIF1ADQ8N9N8 165 aaKnown RBP13.62□□□□□ -0.23
USP49-203ENST00000394253 PAFAH2Q99487 392 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 KLF6Q99612 283 aaPredicted RBP13.62□□□□□ -0.23
USP49-203ENST00000394253 AAGABQ6PD74 315 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 SHQ1Q6PI26 577 aaKnown RBP13.61□□□□□ -0.23
USP49-203ENST00000394253 ARHGAP27Q6ZUM4 889 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 ATXN3LQ9H3M9 355 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 OR2AT4A6NND4 320 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 ITGALP20701 1170 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 PTDSS1P48651 473 aaKnown RBP13.61□□□□□ -0.23
USP49-203ENST00000394253 PGDP52209 483 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 SLCO6A1Q86UG4 719 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 OR56A4Q8NGH8 313 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 KCNK4Q9NYG8 393 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 WDR37Q9Y2I8 494 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 ERBB4Q15303 1308 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 COMTP21964 271 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 LLGL2Q6P1M3 1020 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 MFSD7Q6UXD7 560 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 ZNF280BQ86YH2 543 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.61□□□□□ -0.23
USP49-203ENST00000394253 GJD3Q8N144 294 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 CELF4Q9BZC1 486 aaKnown RBP13.61□□□□□ -0.23
USP49-203ENST00000394253 NEDD4P46934 1319 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 OGFRL1Q5TC84 451 aaPredicted RBP13.61□□□□□ -0.23
USP49-203ENST00000394253 ZNF621Q6ZSS3 439 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 REXO1L1PQ8IX06 675 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 PYDC1Q8WXC3 89 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 EIF2AK1Q9BQI3 630 aaKnown RBP13.61□□□□□ -0.23
USP49-203ENST00000394253 ZNF639Q9UID6 485 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 ATXN2Q99700 1313 aaKnown RBP13.61□□□□□ -0.23
USP49-203ENST00000394253 NR2C2P49116 596 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 ABRQ12979 859 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 MPP3Q13368 585 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 TXNRD1Q16881 649 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 ARHGAP36Q6ZRI8 547 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 ZSCAN18Q8TBC5 510 aaPredicted RBP13.61□□□□□ -0.23
USP49-203ENST00000394253 DMGDHQ9UI17 866 aaKnown RBP13.61□□□□□ -0.23
USP49-203ENST00000394253 MAGEB2O15479 319 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 ZNF208O43345 1280 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 FBLN1P23142 703 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 GRK5P34947 590 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 MED22Q15528 200 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 UTS2BQ765I0 119 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 PLEKHF1Q96S99 279 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 WDCPQ9H6R7 721 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 TMEM8AQ9HCN3 771 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 CYP4F12Q9HCS2 524 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 CYP2C8P10632 490 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 H2AFXP16104 143 aaPredicted RBP13.61□□□□□ -0.23
USP49-203ENST00000394253 HALP42357 657 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 CLK3P49761 638 aaKnown RBP13.61□□□□□ -0.23
USP49-203ENST00000394253 MRPS22P82650 360 aaKnown RBP13.61□□□□□ -0.23
USP49-203ENST00000394253 PITPNAQ00169 270 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 MIIPQ5JXC2 388 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 GRTP1Q5TC63 336 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 GALNTL5Q7Z4T8 443 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 SAPCD2Q86UD0 394 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 TPCN2Q8NHX9 752 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 FEZF2Q8TBJ5 459 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 GMCL1Q96IK5 515 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 CPNE1Q99829 537 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 EXO5Q9H790 373 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms