RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 FNBP1LQ5T0N5 605 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 TMED8Q6PL24 325 aaPredicted RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 PALB2Q86YC2 1186 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 TRMT2AQ8IZ69 625 aaKnown RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 LGI2Q8N0V4 545 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 POC5Q8NA72 575 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 VPS35Q96QK1 796 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 C1QTNF1Q9BXJ1 281 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 ABCG8Q9H221 673 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 SMPD4Q9NXE4 827 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 ZNRF3Q9ULT6 936 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 A0A087WZ62 844 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 ZNF879B4DU55 563 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 STX16-NPEPL1H3BU86 382 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 STX16O14662 325 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 ANXA6P08133 673 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 PGAM1P18669 254 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 IDH2P48735 452 aaKnown RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 LHX1P48742 406 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 HSF2Q03933 536 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 MGAT5Q09328 741 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 TRAP1Q12931 704 aaKnown RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 NRKQ7Z2Y5 1582 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 TRAPPC5Q8IUR0 188 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 RGL4Q8IZJ4 473 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 CHST13Q8NET6 341 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 TCP10LQ8TDR4 215 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 C18orf25Q96B23 403 aaPredicted RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 MYOZ2Q9NPC6 264 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 OSGEPQ9NPF4 335 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 ANKEF1Q9NU02 776 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 MARK1Q9P0L2 795 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 SAE1Q9UBE0 346 aaPredicted RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 TAF6LQ9Y6J9 622 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 PNPLA7Q6ZV29 1317 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 EFCAB6Q5THR3 1501 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 METP08581 1390 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 FAM86B1E9PN63 330 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 GTPBP1O00178 669 aaKnown RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 ZBTB14O43829 449 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 VPS4BO75351 444 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 OR5F1O95221 314 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 RPL9P32969 192 aaKnown RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 FXR2P51116 673 aaKnown RBP eCLIP5.77□□□□□ -1.491e-6■■□□□ 11.5
GAPVD1-206ENST00000394104 MRPS22P82650 360 aaKnown RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 PLD1Q13393 1074 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 SUZ12Q15022 739 aaKnown RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 MARC1Q5VT66 337 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 EXOC3L1Q86VI1 746 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 PCDH20Q8N6Y1 951 aaKnown RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 SETD6Q8TBK2 473 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 GLT1D1Q96MS3 346 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 CDADC1Q9BWV3 514 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 CATSPERZQ9NTU4 200 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 ZNHIT2Q9UHR6 403 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 SHROOM2Q13796 1616 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 HERVK_113P62684 666 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 SPIBQ01892 262 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 ZNHIT3Q15649 155 aaPredicted RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 EZH2Q15910 746 aaKnown RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 WASHC2DQ5SRD0 308 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 TMEM63BQ5T3F8 832 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 TTC23Q5W5X9 447 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 RASSF6Q6ZTQ3 369 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 ARL10Q8N8L6 244 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 FAM98AQ8NCA5 519 aaKnown RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 MCOLN3Q8TDD5 553 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 CCDC115Q96NT0 180 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 CDHR5Q9HBB8 845 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 CRNNQ9UBG3 495 aaPredicted RBP5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 OPTCQ9UBM4 332 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 VPS51Q9UID3 782 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 NUDT5Q9UKK9 219 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 ING4Q9UNL4 249 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 SNCAIPQ9Y6H5 919 aa5.77□□□□□ -1.49
GAPVD1-206ENST00000394104 UGGT1Q9NYU2 1555 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 RBAK-RBAKDNI3L0D1 243 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 RIPK2O43353 540 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 DCXO43602 365 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 FBXO21O94952 628 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 NTRK1P04629 796 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 ALDH2P05091 517 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 S100A6P06703 90 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 ZNF7P17097 686 aaPredicted RBP5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 AMD1P17707 334 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 RPA1P27694 616 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 ACLYP53396 1101 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 SOX10P56693 466 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 BST2Q10589 180 aaKnown RBP5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 INO80DQ53TQ3 878 aaPredicted RBP5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 WDR93Q6P2C0 686 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 TPGS1Q6ZTW0 290 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 USP49Q70CQ1 688 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 GALNTL5Q7Z4T8 443 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 ULK2Q8IYT8 1036 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 ZNF655Q8N720 491 aaPredicted RBP5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 KLHL23Q8NBE8 558 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 ELMO1Q92556 727 aa5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 ZKSCAN4Q969J2 545 aaPredicted RBP5.76□□□□□ -1.49
GAPVD1-206ENST00000394104 RAD51AP1Q96B01 352 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms