RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 CCDC117Q8IWD4 279 aaPredicted RBP8.77□□□□□ -1.01
GABRA1-202ENST00000393943 DCLK2Q8N568 766 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 APPL2Q8NEU8 664 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 ROPN1LQ96C74 230 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 KCTD14Q9BQ13 255 aaPredicted RBP8.77□□□□□ -1.01
GABRA1-202ENST00000393943 DPP3Q9NY33 737 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 TUBGCP4Q9UGJ1 667 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 TSPAN16Q9UKR8 245 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 ITGAXP20702 1163 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 GRIA4P48058 902 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 CLK1P49759 484 aaKnown RBP8.77□□□□□ -1.01
GABRA1-202ENST00000393943 NME3Q13232 169 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 NFYCQ13952 458 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 SV2CQ496J9 727 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 ZNF618Q5T7W0 954 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 VSIG10LQ86VR7 867 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 UNC93AQ86WB7 457 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 TBC1D21Q8IYX1 336 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 RNF139Q8WU17 664 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 NSMCE2Q96MF7 247 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 QKIQ96PU8 341 aaKnown RBP eCLIP8.77□□□□□ -1.01
GABRA1-202ENST00000393943 HPS4Q9NQG7 708 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 TMED5Q9Y3A6 229 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 TPRKBQ9Y3C4 175 aa8.77□□□□□ -1.01
GABRA1-202ENST00000393943 PAPSS1O43252 624 aaPredicted RBP8.76□□□□□ -1.01
GABRA1-202ENST00000393943 ASNA1O43681 348 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 SOAT2O75908 522 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 GPIP06744 558 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 TM4SF1P30408 202 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 GRIK1P39086 918 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 TRAF2Q12933 501 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 RFTN1Q14699 578 aaPredicted RBP8.76□□□□□ -1.01
GABRA1-202ENST00000393943 RFX4Q33E94 735 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 OGFRL1Q5TC84 451 aaPredicted RBP8.76□□□□□ -1.01
GABRA1-202ENST00000393943 ZSWIM2Q8NEG5 633 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 ASB9Q96DX5 294 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 PLEKHG4BQ96PX9 1271 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 DHRS4Q9BTZ2 278 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 STRA6Q9BX79 667 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 POLR1BQ9H9Y6 1135 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 CYLDQ9NQC7 956 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 FBXO28Q9NVF7 368 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 GIN1Q9NXP7 522 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 EURLQ9NYK6 297 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 SUCOQ9UBS9 1254 aaKnown RBP8.76□□□□□ -1.01
GABRA1-202ENST00000393943 ZNF701M0R085 212 aaPredicted RBP8.76□□□□□ -1.01
GABRA1-202ENST00000393943 LYPLA1O75608 230 aaPredicted RBP8.76□□□□□ -1.01
GABRA1-202ENST00000393943 C7P10643 843 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 SLC7A1P30825 629 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 LIMK2P53671 638 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 MMRN1Q13201 1228 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 PTPN20Q4JDL3 420 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 LAYNQ6UX15 382 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 RNF135Q8IUD6 432 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 CCDC60Q8IWA6 550 aaPredicted RBP8.76□□□□□ -1.01
GABRA1-202ENST00000393943 C8orf59Q8N0T1 100 aaPredicted RBP8.76□□□□□ -1.01
GABRA1-202ENST00000393943 PLD5Q8N7P1 536 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 ZNF513Q8N8E2 541 aaPredicted RBP8.76□□□□□ -1.01
GABRA1-202ENST00000393943 OR2T34Q8NGX1 318 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 OR6P1Q8NGX9 317 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 OR2T3Q8NH03 318 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 DQX1Q8TE96 717 aaKnown RBP8.76□□□□□ -1.01
GABRA1-202ENST00000393943 EXT2Q93063 718 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 IFT43Q96FT9 208 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 SNRNP25Q9BV90 132 aaKnown RBP8.76□□□□□ -1.01
GABRA1-202ENST00000393943 IKZF4Q9H2S9 585 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 PIDD1Q9HB75 910 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 PCDH18Q9HCL0 1135 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 DDX28Q9NUL7 540 aaKnown RBP8.76□□□□□ -1.01
GABRA1-202ENST00000393943 FAM198AQ9UFP1 575 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 DHRS12A0PJE2 317 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 CCDC162PA2VCL2 907 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 DLG1Q12959 904 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 SEMA5AQ13591 1074 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 KCTD21Q4G0X4 260 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 ZYG11AQ6WRX3 759 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 TRIM69Q86WT6 500 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 XYLT1Q86Y38 959 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 SMYD1Q8NB12 490 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 CRYGNQ8WXF5 182 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 TBC1D13Q9NVG8 400 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 GPATCH2LQ9NWQ4 482 aa8.76□□□□□ -1.01
GABRA1-202ENST00000393943 DDX60Q8IY21 1712 aaKnown RBP8.76□□□□□ -1.01
GABRA1-202ENST00000393943 COL14A1Q05707 1796 aaKnown RBP8.75□□□□□ -1.01
GABRA1-202ENST00000393943 C2orf71A6NGG8 1288 aa8.75□□□□□ -1.01
GABRA1-202ENST00000393943 F5H423 210 aaPredicted RBP8.75□□□□□ -1.01
GABRA1-202ENST00000393943 B4GALT4O60513 344 aa8.75□□□□□ -1.01
GABRA1-202ENST00000393943 DNAJA2O60884 412 aa8.75□□□□□ -1.01
GABRA1-202ENST00000393943 SUPT7LO94864 414 aa8.75□□□□□ -1.01
GABRA1-202ENST00000393943 UPP2O95045 317 aa8.75□□□□□ -1.01
GABRA1-202ENST00000393943 PDGFRBP09619 1106 aa8.75□□□□□ -1.01
GABRA1-202ENST00000393943 CDH5P33151 784 aaPredicted RBP8.75□□□□□ -1.01
GABRA1-202ENST00000393943 SPP2Q13103 211 aa8.75□□□□□ -1.01
GABRA1-202ENST00000393943 ZNF829Q3KNS6 432 aaPredicted RBP8.75□□□□□ -1.01
GABRA1-202ENST00000393943 SFT2D3Q587I9 215 aa8.75□□□□□ -1.01
GABRA1-202ENST00000393943 ZNF484Q5JVG2 852 aa8.75□□□□□ -1.01
GABRA1-202ENST00000393943 COLGALT2Q8IYK4 626 aa8.75□□□□□ -1.01
GABRA1-202ENST00000393943 FAM47BQ8NA70 645 aa8.75□□□□□ -1.01
GABRA1-202ENST00000393943 PLEKHO2Q8TD55 490 aa8.75□□□□□ -1.01
GABRA1-202ENST00000393943 DIS3LQ8TF46 1054 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms