RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 FBXO22Q8NEZ5 403 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 LRRC8CQ8TDW0 803 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 DIS3LQ8TF46 1054 aaKnown RBP11.22□□□□□ -0.61
CASP3-202ENST00000393585 ALKBH8Q96BT7 664 aaKnown RBP11.22□□□□□ -0.61
CASP3-202ENST00000393585 VAT1Q99536 393 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 TMEM175Q9BSA9 504 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 CCSER2Q9H7U1 834 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 USP15Q9Y4E8 981 aaPredicted RBP11.22□□□□□ -0.61
CASP3-202ENST00000393585 PSAT1Q9Y617 370 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 GREB1Q4ZG55 1949 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 HGSO14964 777 aaPredicted RBP11.22□□□□□ -0.61
CASP3-202ENST00000393585 TM9SF1O15321 606 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 RFPL1O75677 317 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 KRT38O76015 456 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 CNTN5O94779 1100 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 ALDH1A2O94788 518 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 SUN1O94901 812 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 ERVK-10P10266 1014 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 ATF6P18850 670 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 CCNCP24863 283 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 ALDH7A1P49419 539 aaKnown RBP11.22□□□□□ -0.61
CASP3-202ENST00000393585 NEK3P51956 506 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 COG7P83436 770 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 MS4A13Q5J8X5 152 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 FAM117BQ6P1L5 589 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 ANKRD33Q7Z3H0 272 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 ARHGAP18Q8N392 663 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 CCT6BQ92526 530 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 ZNF669Q96BR6 464 aaPredicted RBP11.22□□□□□ -0.61
CASP3-202ENST00000393585 FCRL3Q96P31 734 aaPredicted RBP11.22□□□□□ -0.61
CASP3-202ENST00000393585 SLC13A1Q9BZW2 595 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 TLR8Q9NR97 1041 aaKnown RBP11.22□□□□□ -0.61
CASP3-202ENST00000393585 MARCH2Q9P0N8 246 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 PHTF1Q9UMS5 762 aa11.22□□□□□ -0.61
CASP3-202ENST00000393585 SLC12A8A0AV02 714 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 CCDC78A2IDD5 438 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 H7C4K7 107 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 RTN3O95197 1032 aaPredicted RBP11.21□□□□□ -0.61
CASP3-202ENST00000393585 TOP3BO95985 862 aaKnown RBP11.21□□□□□ -0.61
CASP3-202ENST00000393585 PAPOLAP51003 745 aaKnown RBP11.21□□□□□ -0.61
CASP3-202ENST00000393585 NIPAL4Q0D2K0 466 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 ITIH4Q14624 930 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 ALFQ53S48 1182 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 LGSNQ5TDP6 509 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 RAP1GAP2Q684P5 730 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 ZNF75CPQ92670 426 aaPredicted RBP11.21□□□□□ -0.61
CASP3-202ENST00000393585 TTC17Q96AE7 1141 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 SRPK1Q96SB4 655 aaKnown RBP11.21□□□□□ -0.61
CASP3-202ENST00000393585 VN1R3Q9BXE9 311 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 CASS4Q9NQ75 786 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 ABCF3Q9NUQ8 709 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 PCMTD2Q9NV79 361 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 TMEM51Q9NW97 253 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 BFARQ9NZS9 450 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 ATP11BQ9Y2G3 1177 aa11.21□□□□□ -0.61
CASP3-202ENST00000393585 COPEO14579 308 aa11.21□□□□□ -0.62
CASP3-202ENST00000393585 POLBP06746 335 aa11.21□□□□□ -0.62
CASP3-202ENST00000393585 OR1D2P34982 312 aa11.21□□□□□ -0.62
CASP3-202ENST00000393585 ETV4P43268 484 aa11.21□□□□□ -0.62
CASP3-202ENST00000393585 CIR1Q86X95 450 aaPredicted RBP11.21□□□□□ -0.62
CASP3-202ENST00000393585 ZNF276Q8N554 614 aa11.21□□□□□ -0.62
CASP3-202ENST00000393585 LZTR1Q8N653 840 aa11.21□□□□□ -0.62
CASP3-202ENST00000393585 CCDC63Q8NA47 563 aa11.21□□□□□ -0.62
CASP3-202ENST00000393585 PTPRN2Q92932 1015 aa11.21□□□□□ -0.62
CASP3-202ENST00000393585 MFSD3Q96ES6 412 aa11.21□□□□□ -0.62
CASP3-202ENST00000393585 TSGA13Q96PP4 275 aa11.21□□□□□ -0.62
CASP3-202ENST00000393585 NOL6Q9H6R4 1146 aaKnown RBP11.21□□□□□ -0.62
CASP3-202ENST00000393585 CLIC5Q9NZA1 410 aa11.21□□□□□ -0.62
CASP3-202ENST00000393585 CCT8L1PA6NM43 557 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 MATN3O15232 486 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 TLR5O60602 858 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 ZNF189O75820 626 aaPredicted RBP11.2□□□□□ -0.62
CASP3-202ENST00000393585 HLA-DQB2P05538 268 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 SLC2A3P11169 496 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 HTR7P34969 479 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 PACS1Q6VY07 963 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 MARK2Q7KZI7 788 aaKnown RBP11.2□□□□□ -0.62
CASP3-202ENST00000393585 RASSF3Q86WH2 238 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 CCNJLQ8IV13 435 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 ZNF683Q8IZ20 524 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 CDKL2Q92772 493 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 IGSF8Q969P0 613 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 VWCEQ96DN2 955 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 CERS2Q96G23 380 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 C1orf74Q96LT6 269 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 NAT9Q9BTE0 207 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 IQCGQ9H095 443 aaKnown RBP11.2□□□□□ -0.62
CASP3-202ENST00000393585 CWH43Q9H720 699 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 LRRC40Q9H9A6 602 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 ZFATQ9P243 1243 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 DOCK4Q8N1I0 1966 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 SLC38A8A6NNN8 435 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 ERI2A8K979 691 aaKnown RBP11.2□□□□□ -0.62
CASP3-202ENST00000393585 EDF1O60869 148 aaKnown RBP11.2□□□□□ -0.62
CASP3-202ENST00000393585 NRG1Q02297 640 aaPredicted RBP11.2□□□□□ -0.62
CASP3-202ENST00000393585 ZNF33AQ06730 810 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 MGAT5Q09328 741 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 PRPSAP1Q14558 356 aa11.2□□□□□ -0.62
CASP3-202ENST00000393585 TRIP4Q15650 581 aaPredicted RBP11.2□□□□□ -0.62
CASP3-202ENST00000393585 USP41Q3LFD5 358 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms