RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 GCNAQ96QF7 691 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 VAT1Q99536 393 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 CORO1BQ9BR76 489 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 TMEM109Q9BVC6 243 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 IL21Q9HBE4 155 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 XAB2Q9HCS7 855 aaKnown RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 IGSF9Q9P2J2 1179 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 IPO11Q9UI26 975 aaKnown RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 ADAM21Q9UKJ8 722 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 IRAK3Q9Y616 596 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 CLUHO75153 1309 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 NYNRINQ9P2P1 1898 aaKnown RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 POC1B-GALNT4F8VUJ3 575 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 SCAMP3O14828 347 aaKnown RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 GRM6O15303 877 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 TSPAN3O60637 253 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 MAFKO60675 156 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 RAMP2O60895 175 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 ARHGEF15O94989 841 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 CPP00450 1065 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 KLKB1P03952 638 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 CKMP06732 381 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 CA3P07451 260 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 GJA1P17302 382 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 GRIA1P42261 906 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 NUMBP49757 651 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 CLCN4P51793 760 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 GPX6P59796 221 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 MAGOHP61326 146 aaKnown RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 CDK16Q00536 496 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 UBE3AQ05086 875 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 POLD3Q15054 466 aaPredicted RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 FAM133BQ5BKY9 247 aaKnown RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 AFMIDQ63HM1 303 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 FAM109BQ6ICB4 259 aaPredicted RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 LRRC49Q8IUZ0 686 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 IGDCC3Q8IVU1 814 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 MAB21L3Q8N8X9 362 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 WBP2Q969T9 261 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 TEKT5Q96M29 485 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 SLC22A12Q96S37 553 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 STMN4Q9H169 189 aaPredicted RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 GBA3Q9H227 469 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 NOL6Q9H6R4 1146 aaKnown RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 SP110Q9HB58 689 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 ASAH2Q9NR71 780 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 RBM22Q9NW64 420 aaKnown RBP eCLIP8.84□□□□□ -0.99
TDP1-203ENST00000393454 PIH1D1Q9NWS0 290 aaKnown RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 AGO1Q9UL18 857 aaKnown RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 MAD1L1Q9Y6D9 718 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 ZFP37Q9Y6Q3 630 aaPredicted RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 LAMA2P24043 3122 aaKnown RBP8.83□□□□□ -1
TDP1-203ENST00000393454 A0A1W2PRU2 124 aa8.83□□□□□ -1
TDP1-203ENST00000393454 RB1P06400 928 aa8.83□□□□□ -1
TDP1-203ENST00000393454 NR1D1P20393 614 aa8.83□□□□□ -1
TDP1-203ENST00000393454 CD68P34810 354 aaPredicted RBP8.83□□□□□ -1
TDP1-203ENST00000393454 IRS1P35568 1242 aa8.83□□□□□ -1
TDP1-203ENST00000393454 MAPKAPK2P49137 400 aa8.83□□□□□ -1
TDP1-203ENST00000393454 ATP1A2P50993 1020 aa8.83□□□□□ -1
TDP1-203ENST00000393454 SESN2P58004 480 aaPredicted RBP8.83□□□□□ -1
TDP1-203ENST00000393454 PPARDQ03181 441 aa8.83□□□□□ -1
TDP1-203ENST00000393454 SHHQ15465 462 aa8.83□□□□□ -1
TDP1-203ENST00000393454 ANO4Q32M45 955 aa8.83□□□□□ -1
TDP1-203ENST00000393454 ADGRF1Q5T601 910 aa8.83□□□□□ -1
TDP1-203ENST00000393454 CASC4Q6P4E1 433 aa8.83□□□□□ -1
TDP1-203ENST00000393454 GAREM2Q75VX8 874 aa8.83□□□□□ -1
TDP1-203ENST00000393454 OTOP3Q7RTS5 596 aa8.83□□□□□ -1
TDP1-203ENST00000393454 FBF1Q8TES7 1133 aa8.83□□□□□ -1
TDP1-203ENST00000393454 NSMCE1Q8WV22 266 aa8.83□□□□□ -1
TDP1-203ENST00000393454 AZIN2Q96A70 460 aa8.83□□□□□ -1
TDP1-203ENST00000393454 PABPC5Q96DU9 382 aaKnown RBP8.83□□□□□ -1
TDP1-203ENST00000393454 PKNOX2Q96KN3 472 aa8.83□□□□□ -1
TDP1-203ENST00000393454 DDX50Q9BQ39 737 aaKnown RBP8.83□□□□□ -1
TDP1-203ENST00000393454 WDR83Q9BRX9 315 aaKnown RBP8.83□□□□□ -1
TDP1-203ENST00000393454 CERS4Q9HA82 394 aa8.83□□□□□ -1
TDP1-203ENST00000393454 MAN1C1Q9NR34 630 aa8.83□□□□□ -1
TDP1-203ENST00000393454 EIF2B3Q9NR50 452 aaKnown RBP8.83□□□□□ -1
TDP1-203ENST00000393454 UBP1Q9NZI7 540 aa8.83□□□□□ -1
TDP1-203ENST00000393454 ZC3H7BQ9UGR2 993 aaKnown RBP8.83□□□□□ -1
TDP1-203ENST00000393454 TBK1Q9UHD2 729 aa8.83□□□□□ -1
TDP1-203ENST00000393454 CPQQ9Y646 472 aa8.83□□□□□ -1
TDP1-203ENST00000393454 TEX264Q9Y6I9 313 aa8.83□□□□□ -1
TDP1-203ENST00000393454 MTCL1Q9Y4B5 1905 aaKnown RBP8.83□□□□□ -1
TDP1-203ENST00000393454 MYO7AQ13402 2215 aa8.83□□□□□ -1
TDP1-203ENST00000393454 TRAV19A0A0A6YYK7 116 aa8.82□□□□□ -1
TDP1-203ENST00000393454 C5orf67F2Z3F1 127 aa8.82□□□□□ -1
TDP1-203ENST00000393454 J3KR12 359 aa8.82□□□□□ -1
TDP1-203ENST00000393454 RFPL2O75678 378 aa8.82□□□□□ -1
TDP1-203ENST00000393454 CDC25CP30307 473 aa8.82□□□□□ -1
TDP1-203ENST00000393454 MAGEA10P43363 369 aaPredicted RBP8.82□□□□□ -1
TDP1-203ENST00000393454 RPS24P62847 133 aaKnown RBP8.82□□□□□ -1
TDP1-203ENST00000393454 IFI35P80217 286 aaPredicted RBP8.82□□□□□ -1
TDP1-203ENST00000393454 ITKQ08881 620 aa8.82□□□□□ -1
TDP1-203ENST00000393454 GPM6BQ13491 265 aa8.82□□□□□ -1
TDP1-203ENST00000393454 LRRC8BQ6P9F7 803 aa8.82□□□□□ -1
TDP1-203ENST00000393454 ZNF534Q76KX8 674 aa8.82□□□□□ -1
TDP1-203ENST00000393454 TMC8Q8IU68 726 aa8.82□□□□□ -1
TDP1-203ENST00000393454 CNTD1Q8N815 330 aa8.82□□□□□ -1
TDP1-203ENST00000393454 PGM2Q96G03 612 aa8.82□□□□□ -1
TDP1-203ENST00000393454 TGS1Q96RS0 853 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms