RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 GDF9O60383 454 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 MFAP3LO75121 409 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 RHOBTB1O94844 696 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 LRIG2O94898 1065 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 ASLP04424 464 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 OR1E1P30953 314 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 ACVRL1P37023 503 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 MPLP40238 635 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 PSMD8P48556 350 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 TPMTP51580 245 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 METAP1P53582 386 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 RPS14P62263 151 aaKnown RBP7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 MTA1Q13330 715 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 HNRNPA1L2Q32P51 320 aaKnown RBP7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 POM121L1PQ3SYA9 428 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 ACCSLQ4AC99 568 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 EFHC2Q5JST6 749 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 CCDC122Q5T0U0 273 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 C9orf64Q5T6V5 341 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 MANEALQ5VSG8 457 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 Q6ZVU0 165 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 LPCAT2Q7L5N7 544 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 SLFN11Q7Z7L1 901 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 NLRP14Q86W24 1093 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 MMAAQ8IVH4 418 aaKnown RBP7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 SLC41A1Q8IVJ1 513 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 STK40Q8N2I9 435 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 EFCAB3Q8N7B9 438 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 NETO2Q8NC67 525 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 PIGKQ92643 395 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 PRCCQ92733 491 aaPredicted RBP7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 NTAN1Q96AB6 310 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 TBC1D31Q96DN5 1066 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 TOE1Q96GM8 510 aaKnown RBP7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 VCPIP1Q96JH7 1222 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 C1orf74Q96LT6 269 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 DNAJC7Q99615 494 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 CHP1Q99653 195 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 SPON2Q9BUD6 331 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 GPR174Q9BXC1 333 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 TRIM5Q9C035 493 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 FSCN3Q9NQT6 498 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 ABHD10Q9NUJ1 306 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 TMEM74BQ9NUR3 256 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 SERGEFQ9UGK8 458 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 VPS51Q9UID3 782 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 FZD10Q9ULW2 581 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 NENFQ9UMX5 172 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 BZW2Q9Y6E2 419 aaKnown RBP7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 LAMA1P25391 3075 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 EDDM13A0A1B0GTR0 161 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 BCLAF3A2AJT9 711 aaKnown RBP7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 RNF103O00237 685 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 CBX4O00257 560 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 MID1O15344 667 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 SMAD6O43541 496 aaKnown RBP7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 SRPRAP08240 638 aaKnown RBP7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 ACADMP11310 421 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 SRCP12931 536 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 ITPKAP23677 461 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 MAOBP27338 520 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 CD6P30203 668 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 MIPP30301 263 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 HNRNPH3P31942 346 aaKnown RBP7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 ACSL1P33121 698 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 PLK1P53350 603 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 GALCP54803 685 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 ARF5P84085 180 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 SCAPQ12770 1279 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 SLC12A1Q13621 1099 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 SMTNL2Q2TAL5 461 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 KCNT1Q5JUK3 1230 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 C6orf118Q5T5N4 469 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 LYSMD4Q5XG99 296 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 TXNRD3NBQ6F5E7 133 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 PPP1R2P3Q6NXS1 205 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 ALKBH5Q6P6C2 394 aaKnown RBP7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 PRR23CQ6ZRP0 262 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 CYP4V2Q6ZWL3 525 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 CYP2U1Q7Z449 544 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 SETD3Q86TU7 594 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 VPS36Q86VN1 386 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 ATP11CQ8NB49 1132 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 OR8K1Q8NGG5 319 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 GANCQ8TET4 914 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 FRS2Q8WU20 508 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 PTPRN2Q92932 1015 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 IQCDQ96DY2 449 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 HSPA12BQ96MM6 686 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 KCTD15Q96SI1 283 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 SNRNP25Q9BV90 132 aaKnown RBP7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 NUP85Q9BW27 656 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 OSBPL2Q9H1P3 480 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 RSPH9Q9H1X1 276 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 TNKS2Q9H2K2 1166 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 DHX35Q9H5Z1 703 aaKnown RBP7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 ATP13A1Q9HD20 1204 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 ITM2CQ9NQX7 267 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 SPTLC3Q9NUV7 552 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 USP36Q9P275 1121 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms