RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 EZH1Q92800 747 aaPredicted RBP13.6□□□□□ -0.23
USP44-202ENST00000393091 MRGPRX3Q96LB0 322 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 WDR24Q96S15 920 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 OSBPL8Q9BZF1 889 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 CLEC4EQ9ULY5 219 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 PIAS3Q9Y6X2 628 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 MYO10Q9HD67 2058 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 EYSQ5T1H1 3165 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 APOL1O14791 398 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 PRAMEF11O60813 436 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 NUBP1P53384 320 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 PPIDQ08752 370 aaKnown RBP13.6□□□□□ -0.23
USP44-202ENST00000393091 NOMO1Q15155 1222 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 PLEKHG6Q3KR16 790 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 FUT11Q495W5 492 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 FSCBQ5H9T9 825 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 MFN1Q8IWA4 741 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 NPWQ8N729 165 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 OR52K2Q8NGK3 314 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 MYO19Q96H55 970 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 OSBPL9Q96SU4 736 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 UHRF1Q96T88 793 aaPredicted RBP13.6□□□□□ -0.23
USP44-202ENST00000393091 GABRG3Q99928 467 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 SIK2Q9H0K1 926 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 CHRDQ9H2X0 955 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 ARHGEF3Q9NR81 526 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 TRMT1Q9NXH9 659 aaKnown RBP13.6□□□□□ -0.23
USP44-202ENST00000393091 DEC1Q9P2X7 70 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 THAP10Q9P2Z0 257 aaPredicted RBP13.6□□□□□ -0.23
USP44-202ENST00000393091 HCN2Q9UL51 889 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 LRRD1A4D1F6 860 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 ATP9BO43861 1147 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 ATP1A1P05023 1023 aaKnown RBP13.59□□□□□ -0.23
USP44-202ENST00000393091 GALK1P51570 392 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 PITRM1Q5JRX3 1037 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 ZNF852Q6ZMS4 543 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 NUDT18Q6ZVK8 323 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 SLC13A5Q86YT5 568 aaPredicted RBP13.59□□□□□ -0.23
USP44-202ENST00000393091 FBRSQ9HAH7 460 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 HOMER3Q9NSC5 361 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 MRPS17Q9Y2R5 130 aaKnown RBP13.59□□□□□ -0.23
USP44-202ENST00000393091 KRBA1A5PL33 1030 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 ARHGAP42A6NI28 874 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 ALADP13716 330 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 IFI35P80217 286 aaPredicted RBP13.59□□□□□ -0.23
USP44-202ENST00000393091 MMRN1Q13201 1228 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 TMEM215Q68D42 235 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 NKD2Q969F2 451 aaPredicted RBP13.59□□□□□ -0.23
USP44-202ENST00000393091 TMEM245Q9H330 911 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 NDFIP2Q9NV92 336 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 DTLQ9NZJ0 730 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 MPP6Q9NZW5 540 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 CTAGE9A4FU28 777 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 CD160O95971 181 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 APODP05090 189 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 MX2P20592 715 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 AMPD1P23109 780 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 OR1E1P30953 314 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 VCPP55072 806 aaKnown RBP13.59□□□□□ -0.23
USP44-202ENST00000393091 LRRC32Q14392 662 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 PTPRNQ16849 979 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 SLC35B2Q8TB61 432 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 SLCO2A1Q92959 643 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 NAP1L3Q99457 506 aaPredicted RBP13.59□□□□□ -0.23
USP44-202ENST00000393091 HERPUD2Q9BSE4 406 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 ETNK2Q9NVF9 386 aa13.59□□□□□ -0.23
USP44-202ENST00000393091 DRG1Q9Y295 367 aaKnown RBP13.59□□□□□ -0.23
USP44-202ENST00000393091 KANSL1LA0AUZ9 987 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 BCLAF3A2AJT9 711 aaKnown RBP13.58□□□□□ -0.24
USP44-202ENST00000393091 RASA4BC9J798 803 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 RASA4O43374 803 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 DCXO43602 365 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 CREB3O43889 395 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 TSPAN3O60637 253 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 MAFKO60675 156 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 RAMP2O60895 175 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 RHOCP08134 193 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 CD70P32970 193 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 GARSP41250 739 aaKnown RBP13.58□□□□□ -0.24
USP44-202ENST00000393091 SLC6A11P48066 632 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 SLC10A2Q12908 348 aaPredicted RBP13.58□□□□□ -0.24
USP44-202ENST00000393091 FAM131CQ96AQ9 280 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 TADA1Q96BN2 335 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 QKIQ96PU8 341 aaKnown RBP eCLIP13.58□□□□□ -0.24
USP44-202ENST00000393091 SLC39A8Q9C0K1 460 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 LTB4R2Q9NPC1 389 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 C10orf142B7Z368 130 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 H0Y626 953 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 ALOX15BO15296 676 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 SRGAP2O75044 1071 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 KAT7O95251 611 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 CHRNB1P11230 501 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 SEL1L2Q5TEA6 688 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 TIGD7Q6NT04 549 aaPredicted RBP13.58□□□□□ -0.24
USP44-202ENST00000393091 TPGS1Q6ZTW0 290 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 CFAP52Q8N1V2 620 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 FAM3CQ92520 227 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 VOPP1Q96AW1 172 aa13.58□□□□□ -0.24
USP44-202ENST00000393091 DNAJC17Q9NVM6 304 aaKnown RBP13.58□□□□□ -0.24
USP44-202ENST00000393091 DLGAP2Q9P1A6 1054 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms