RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 STK38LQ9Y2H1 464 aa26.14■■□□□ 1.78
SMARCD3-203ENST00000392811 TTC3P53804 2025 aa26.14■■□□□ 1.78
SMARCD3-203ENST00000392811 FGF10O15520 208 aaPredicted RBP26.14■■□□□ 1.77
SMARCD3-203ENST00000392811 GLRA3O75311 464 aa26.14■■□□□ 1.77
SMARCD3-203ENST00000392811 TPH1P17752 444 aa26.14■■□□□ 1.77
SMARCD3-203ENST00000392811 HTR7P34969 479 aa26.14■■□□□ 1.77
SMARCD3-203ENST00000392811 OCRLQ01968 901 aa26.14■■□□□ 1.77
SMARCD3-203ENST00000392811 NOGQ13253 232 aa26.14■■□□□ 1.77
SMARCD3-203ENST00000392811 FRG1Q14331 258 aaKnown RBP26.14■■□□□ 1.77
SMARCD3-203ENST00000392811 GRTP1Q5TC63 336 aa26.14■■□□□ 1.77
SMARCD3-203ENST00000392811 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.14■■□□□ 1.77
SMARCD3-203ENST00000392811 RAB3IL1Q8TBN0 382 aa26.14■■□□□ 1.77
SMARCD3-203ENST00000392811 MFSD3Q96ES6 412 aa26.14■■□□□ 1.77
SMARCD3-203ENST00000392811 CATSPERBQ9H7T0 1116 aa26.14■■□□□ 1.77
SMARCD3-203ENST00000392811 ZNF395Q9H8N7 513 aaPredicted RBP26.14■■□□□ 1.77
SMARCD3-203ENST00000392811 NOD2Q9HC29 1040 aa26.14■■□□□ 1.77
SMARCD3-203ENST00000392811 FAM237BA0A1B0GVD1 139 aa26.13■■□□□ 1.77
SMARCD3-203ENST00000392811 GSRP00390 522 aa26.13■■□□□ 1.77
SMARCD3-203ENST00000392811 GPR15P49685 360 aa26.13■■□□□ 1.77
SMARCD3-203ENST00000392811 DDR2Q16832 855 aa26.13■■□□□ 1.77
SMARCD3-203ENST00000392811 CTC1Q2NKJ3 1217 aa26.13■■□□□ 1.77
SMARCD3-203ENST00000392811 N4BP2L1Q5TBK1 243 aaPredicted RBP26.13■■□□□ 1.77
SMARCD3-203ENST00000392811 CD99L2Q8TCZ2 262 aa26.13■■□□□ 1.77
SMARCD3-203ENST00000392811 SLC39A8Q9C0K1 460 aa26.13■■□□□ 1.77
SMARCD3-203ENST00000392811 MRPL42Q9Y6G3 142 aaKnown RBP26.13■■□□□ 1.77
SMARCD3-203ENST00000392811 C2orf71A6NGG8 1288 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 KCNU1A8MYU2 1149 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 CHUKO15111 745 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 CACNG3O60359 315 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 MOCS2O96007 188 aaPredicted RBP26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 MYL2P10916 166 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 SKA1Q96BD8 255 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 SLC7A6OSQ96CW6 309 aaPredicted RBP26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 AGAP2Q99490 1192 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 CHRAC1Q9NRG0 131 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 NDFIP2Q9NV92 336 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 MAGEB16A2A368 324 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 SERPINB3P29508 390 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 NAPEPLDQ6IQ20 393 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 KLHDC8BQ8IXV7 354 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 LZTR1Q8N653 840 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 INPP5DQ92835 1189 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 ATP2A3Q93084 1043 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 UTP4Q969X6 686 aaKnown RBP26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 ZNF419Q96HQ0 510 aaPredicted RBP26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 FAM193BQ96PV7 902 aaPredicted RBP26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 RBBP8Q99708 897 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 IL22Q9GZX6 179 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 SAR1AQ9NR31 198 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 DCDC2Q9UHG0 476 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 SCML2Q9UQR0 700 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 HS3ST4Q9Y661 456 aa26.12■■□□□ 1.77
SMARCD3-203ENST00000392811 A0A1W2PQ45 241 aaPredicted RBP26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 A0A1W2PQY0 241 aa26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 MAFKO60675 156 aa26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 SNNO75324 88 aaPredicted RBP26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 GRK4P32298 578 aa26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 TUBP50607 506 aa26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 CDH17Q12864 832 aa26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 NFE2Q16621 373 aaPredicted RBP26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 FASTKD1Q53R41 847 aaKnown RBP26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 PPM1JQ5JR12 505 aa26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 VARS2Q5ST30 1063 aaKnown RBP26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 TEDDM1Q5T9Z0 273 aa26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 STRA8Q7Z7C7 330 aa26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 C14orf80Q86SX3 495 aa26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 NUP93Q8N1F7 819 aa26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 SPATA22Q8NHS9 363 aa26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 FUBP3Q96I24 572 aaKnown RBP eCLIP26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 SERPINB11Q96P15 392 aa26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 SOX13Q9UN79 622 aa26.11■■□□□ 1.77
SMARCD3-203ENST00000392811 A8MUI8 341 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 PSMD3O43242 534 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 PLIN3O60664 434 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 DNAJC6O75061 913 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 TADA2AO75478 443 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 F7P08709 466 aaPredicted RBP26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 HOXD10P28358 340 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 TYK2P29597 1187 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 HSP90AA5PQ58FG0 334 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 ZCCHC23Q6ZST2 131 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 MON1AQ86VX9 555 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 SLC43A3Q8NBI5 491 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 AZIN2Q96A70 460 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 C8orf48Q96LL4 319 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 RAB3IPQ96QF0 476 aaPredicted RBP26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 IL12RB2Q99665 862 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 TSEN34Q9BSV6 310 aaKnown RBP26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 C20orf27Q9GZN8 174 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 FBXO6Q9NRD1 293 aaPredicted RBP26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 ADAM28Q9UKQ2 775 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 BRCA2P51587 3418 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 E9PAM4 449 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 STX3Q13277 289 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 CCDC91Q7Z6B0 441 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 LINC00523Q86TU6 105 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 DCLK2Q8N568 766 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 RAET1EQ8TD07 263 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 STARD7Q9NQZ5 370 aa26.1■■□□□ 1.77
SMARCD3-203ENST00000392811 MATN3O15232 486 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms