RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 WHAMMP3Q1A5X7 153 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 PARP15Q460N3 678 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 IER5LQ5T953 404 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 IL31Q6EBC2 164 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 LEKR1Q6ZMV7 388 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 ETFBKMTQ8IXQ9 262 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 PRELID2Q8N945 189 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 TTC13Q8NBP0 860 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 CCNYQ8ND76 341 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 LGMNQ99538 433 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 FEM1AQ9BSK4 669 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 MAGEH1Q9H213 219 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 ATP13A1Q9HD20 1204 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 GGA2Q9UJY4 613 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 VPS28Q9UK41 221 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 ARHGAP42A6NI28 874 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 C19orf67A6NJJ6 358 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 MCF2LO15068 1137 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 CISD3P0C7P0 127 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 SRFP11831 508 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 PABPC1P11940 636 aaKnown RBP17.44■□□□□ 0.38
ERCC2-202ENST00000391942 GARSP41250 739 aaKnown RBP17.44■□□□□ 0.38
ERCC2-202ENST00000391942 YBEYP58557 167 aaPredicted RBP17.44■□□□□ 0.38
ERCC2-202ENST00000391942 TUBB2AQ13885 445 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 FUT11Q495W5 492 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 FAM182AQ5T1J6 154 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 GRAMD4Q6IC98 578 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 ATPAF2Q8N5M1 289 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 LMLNQ96KR4 655 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 OLFM3Q96PB7 478 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 TUBB2BQ9BVA1 445 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 SLC2A11Q9BYW1 496 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 DEC1Q9P2X7 70 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 FBXO10Q9UK96 956 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 DNPEPQ9ULA0 475 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 PIAS3Q9Y6X2 628 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 KIAA1549LQ6ZVL6 1849 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 SHROOM3Q8TF72 1996 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 GOLGA6L10A0A0M3HER8 536 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 CBX4O00257 560 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 LIASO43766 372 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 SNAP91O60641 907 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 OXCT1P55809 520 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 CKAP4Q07065 602 aaKnown RBP17.43■□□□□ 0.38
ERCC2-202ENST00000391942 C2orf54Q08AI8 447 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 AP1B1Q10567 949 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 SERINC3Q13530 473 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 PDK1Q15118 436 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 KCTD19Q17RG1 926 aaPredicted RBP17.43■□□□□ 0.38
ERCC2-202ENST00000391942 GEN1Q17RS7 908 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 PITRM1Q5JRX3 1037 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 DARS2Q6PI48 645 aaKnown RBP17.43■□□□□ 0.38
ERCC2-202ENST00000391942 BZW1Q7L1Q6 419 aaKnown RBP17.43■□□□□ 0.38
ERCC2-202ENST00000391942 DNASE1L2Q92874 299 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 ALG14Q96F25 216 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 RBM12Q9NTZ6 932 aaKnown RBP17.43■□□□□ 0.38
ERCC2-202ENST00000391942 INTS6Q9UL03 887 aaKnown RBP17.43■□□□□ 0.38
ERCC2-202ENST00000391942 OR51B4Q9Y5P0 310 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 RAD54BQ9Y620 910 aa17.43■□□□□ 0.38
ERCC2-202ENST00000391942 SPECC1L-ADORA2AF8WAN1 911 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 J3KR12 359 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 PPP1R12AO14974 1030 aaPredicted RBP17.42■□□□□ 0.38
ERCC2-202ENST00000391942 RBP3P10745 1247 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 MX2P20592 715 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 KCNJ1P48048 391 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 PFKPQ01813 784 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 CCNG2Q16589 344 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 PLEKHG6Q3KR16 790 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 ZNF783Q6ZMS7 281 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 RNF135Q8IUD6 432 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 SFTPA1Q8IWL2 248 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 KLHL7Q8IXQ5 586 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 ZNF557Q8N988 423 aaPredicted RBP17.42■□□□□ 0.38
ERCC2-202ENST00000391942 SLC35B2Q8TB61 432 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 TFB1MQ8WVM0 346 aaKnown RBP17.42■□□□□ 0.38
ERCC2-202ENST00000391942 MAGOHBQ96A72 148 aaKnown RBP17.42■□□□□ 0.38
ERCC2-202ENST00000391942 NECAB3Q96P71 396 aaPredicted RBP17.42■□□□□ 0.38
ERCC2-202ENST00000391942 SP110Q9HB58 689 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 TRPV5Q9NQA5 729 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 SLC2A4RGQ9NR83 387 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 IPO11Q9UI26 975 aaKnown RBP17.42■□□□□ 0.38
ERCC2-202ENST00000391942 DUSP12Q9UNI6 340 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 SORCS3Q9UPU3 1222 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 CHD5Q8TDI0 1954 aa17.42■□□□□ 0.38
ERCC2-202ENST00000391942 NCAM2O15394 837 aa17.41■□□□□ 0.38
ERCC2-202ENST00000391942 MAFKO60675 156 aa17.41■□□□□ 0.38
ERCC2-202ENST00000391942 PHF2O75151 1096 aa17.41■□□□□ 0.38
ERCC2-202ENST00000391942 CTHP32929 405 aa17.41■□□□□ 0.38
ERCC2-202ENST00000391942 ETFBP38117 255 aa17.41■□□□□ 0.38
ERCC2-202ENST00000391942 CTSOP43234 321 aaPredicted RBP17.41■□□□□ 0.38
ERCC2-202ENST00000391942 BYSLQ13895 437 aaKnown RBP17.41■□□□□ 0.38
ERCC2-202ENST00000391942 TMEM215Q68D42 235 aa17.41■□□□□ 0.38
ERCC2-202ENST00000391942 TTC27Q6P3X3 843 aa17.41■□□□□ 0.38
ERCC2-202ENST00000391942 TXNDC11Q6PKC3 985 aa17.41■□□□□ 0.38
ERCC2-202ENST00000391942 LINGO4Q6UY18 593 aa17.41■□□□□ 0.38
ERCC2-202ENST00000391942 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.41■□□□□ 0.38
ERCC2-202ENST00000391942 SPATA4Q8NEY3 305 aa17.41■□□□□ 0.38
ERCC2-202ENST00000391942 HDAC11Q96DB2 347 aa17.41■□□□□ 0.38
ERCC2-202ENST00000391942 QKIQ96PU8 341 aaKnown RBP eCLIP17.41■□□□□ 0.38
ERCC2-202ENST00000391942 PNKPQ96T60 521 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms