RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 PIAS2O75928 621 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 LUC7L3O95232 432 aaKnown RBP12.18□□□□□ -0.46
SOD1-202ENST00000389995 CALCAP01258 141 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 CD19P15391 556 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 NR2F2P24468 414 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 CLDN2P57739 230 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 TAS2R38P59533 333 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 BST2Q10589 180 aaKnown RBP12.18□□□□□ -0.46
SOD1-202ENST00000389995 ELAVL3Q14576 367 aaKnown RBP12.18□□□□□ -0.46
SOD1-202ENST00000389995 DRAP1Q14919 205 aaPredicted RBP12.18□□□□□ -0.46
SOD1-202ENST00000389995 ISXQ2M1V0 245 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 HS1BP3Q53T59 392 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 MS4A13Q5J8X5 152 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 AGBL4Q5VU57 503 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 RNF219Q5W0B1 726 aaPredicted RBP12.18□□□□□ -0.46
SOD1-202ENST00000389995 NUGGCQ68CJ6 796 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 CCDC81Q6ZN84 652 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 CIR1Q86X95 450 aaPredicted RBP12.18□□□□□ -0.46
SOD1-202ENST00000389995 UNC45BQ8IWX7 931 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 FAM186BQ8IYM0 893 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 KDM1BQ8NB78 822 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 OR13H1Q8NG92 308 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 IFI44Q8TCB0 444 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 MAPK15Q8TD08 544 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 TMEM174Q8WUU8 243 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 PRR11Q96HE9 360 aaPredicted RBP12.18□□□□□ -0.46
SOD1-202ENST00000389995 FCRL2Q96LA5 508 aaPredicted RBP12.18□□□□□ -0.46
SOD1-202ENST00000389995 CALN1Q9BXU9 219 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 FAM117AQ9C073 453 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 MAGEF1Q9HAY2 307 aa12.18□□□□□ -0.46
SOD1-202ENST00000389995 HEMK1Q9Y5R4 338 aaPredicted RBP12.18□□□□□ -0.46
SOD1-202ENST00000389995 CPED1A4D0V7 1026 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 PRAMEF26H0Y7S4 382 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 EFSO43281 561 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 CALUO43852 315 aaPredicted RBP12.17□□□□□ -0.46
SOD1-202ENST00000389995 BNIP3LO60238 219 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 MAGEC1O60732 1142 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 RNGTTO60942 597 aaKnown RBP12.17□□□□□ -0.46
SOD1-202ENST00000389995 KRT13P13646 458 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 PDGFRAP16234 1089 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 RBMS1P29558 406 aaKnown RBP12.17□□□□□ -0.46
SOD1-202ENST00000389995 SRSF6Q13247 344 aaKnown RBP12.17□□□□□ -0.46
SOD1-202ENST00000389995 CLN3Q13286 438 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 CDKN3Q16667 212 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 LINC00303Q3SY05 128 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 SETMARQ53H47 684 aaPredicted RBP12.17□□□□□ -0.46
SOD1-202ENST00000389995 SGO2Q562F6 1265 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 RAP1GAP2Q684P5 730 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 PMF1Q6P1K2 205 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 TRIM69Q86WT6 500 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 CCDC117Q8IWD4 279 aaPredicted RBP12.17□□□□□ -0.46
SOD1-202ENST00000389995 LGI2Q8N0V4 545 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 SLC22A18ASQ8N1D0 253 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 FRS2Q8WU20 508 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 FAM131CQ96AQ9 280 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 ARRDC3Q96B67 414 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 PAGE5Q96GU1 130 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 SLC46A1Q96NT5 459 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 TMEM8AQ9HCN3 771 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 KLHL11Q9NVR0 708 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 HESX1Q9UBX0 185 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 DMTF1Q9Y222 760 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 UNC79Q9P2D8 2635 aa12.17□□□□□ -0.46
SOD1-202ENST00000389995 USP9YO00507 2555 aaPredicted RBP12.17□□□□□ -0.46
SOD1-202ENST00000389995 A0A1W2PQU0 124 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 TYW5A2RUC4 315 aaKnown RBP12.16□□□□□ -0.46
SOD1-202ENST00000389995 K7ELQ4 463 aaPredicted RBP12.16□□□□□ -0.46
SOD1-202ENST00000389995 K7ESM1 405 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 RNF103O00237 685 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 MOCS3O95396 460 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 LTFP02788 710 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 FYNP06241 537 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 SKOR1P84550 965 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 OVGP1Q12889 678 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 ACCSLQ4AC99 568 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 KRT39Q6A163 491 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 OR6B2Q6IFH4 312 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 GUSBP11Q6P575 273 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 INTS8Q75QN2 995 aaKnown RBP12.16□□□□□ -0.46
SOD1-202ENST00000389995 ZNF557Q8N988 423 aaPredicted RBP12.16□□□□□ -0.46
SOD1-202ENST00000389995 TMEM145Q8NBT3 493 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 KCTD13Q8WZ19 329 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 TFAP2BQ92481 460 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 SPAG5Q96R06 1193 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 MIS12Q9H081 205 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 ZSCAN16Q9H4T2 348 aaPredicted RBP12.16□□□□□ -0.46
SOD1-202ENST00000389995 CNGB3Q9NQW8 809 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 DNAJC28Q9NX36 388 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 RAB20Q9NX57 234 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 PCDHA7Q9UN72 937 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 NAALADL1Q9UQQ1 740 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 TRAF3IP3Q9Y228 551 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 ENTPD2Q9Y5L3 495 aa12.16□□□□□ -0.46
SOD1-202ENST00000389995 O00370 1275 aa12.15□□□□□ -0.46
SOD1-202ENST00000389995 TERTO14746 1132 aaKnown RBP12.15□□□□□ -0.46
SOD1-202ENST00000389995 MAPK13O15264 365 aa12.15□□□□□ -0.46
SOD1-202ENST00000389995 ACTN4O43707 911 aaKnown RBP12.15□□□□□ -0.46
SOD1-202ENST00000389995 MXI1P50539 228 aa12.15□□□□□ -0.46
SOD1-202ENST00000389995 LRMPQ12912 555 aa12.15□□□□□ -0.46
SOD1-202ENST00000389995 RESP18Q5W5W9 173 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms