RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 SLC39A10Q9ULF5 831 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 CFLARO15519 480 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 BPGMP07738 259 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 ERCC2P18074 760 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 HOXD10P28358 340 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 ACADSBP45954 432 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 SLC1A6P48664 564 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 SEPT6Q14141 434 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 DPYSL2Q16555 572 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 SV2CQ496J9 727 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 MAP3K21Q5TCX8 1036 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 CWF19L1Q69YN2 538 aaKnown RBP12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 ARHGAP22Q7Z5H3 698 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 MAB21L3Q8N8X9 362 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 RHOBTB2Q9BYZ6 727 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 SUDS3Q9H7L9 328 aaPredicted RBP12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 KCNK13Q9HB14 408 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 FETUBQ9UGM5 382 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 WASF2Q9Y6W5 498 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 GPR182O15218 404 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 ENDOD1O94919 500 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 THP07101 528 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 ITGA2BP08514 1039 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 PACS1Q6VY07 963 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 UNC93AQ86WB7 457 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 MFSD3Q96ES6 412 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 GLT1D1Q96MS3 346 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 AGAP2Q99490 1192 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 DGKIO75912 1065 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 PTPN1P18031 435 aaKnown RBP12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 NR2C2P49116 596 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 ITKQ08881 620 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 CERCAMQ5T4B2 595 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 KIAA0319Q5VV43 1072 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 PDZD4Q76G19 769 aaPredicted RBP12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 SDCCAG8Q86SQ7 713 aaPredicted RBP12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 CHSY1Q86X52 802 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 RNF135Q8IUD6 432 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 ZNF567Q8N184 647 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 SPATA6LQ8N4H0 392 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 IARS2Q9NSE4 1012 aaKnown RBP12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 DLGAP2Q9P1A6 1054 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 FAM72CH0Y354 149 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 USP1O94782 785 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 LUC7L3O95232 432 aaKnown RBP12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 NPR3P17342 541 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 CUL3Q13618 768 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 WASHC2DQ5SRD0 308 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 FAM72AQ5TYM5 149 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 RNF220Q5VTB9 566 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 LHX8Q68G74 356 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 FAM72DQ6L9T8 149 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 FAM72BQ86X60 149 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 SCUBE1Q8IWY4 988 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 CCNYL1Q8N7R7 359 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 ZNF398Q8TD17 642 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 SCG3Q8WXD2 468 aaKnown RBP12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 SENP8Q96LD8 212 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 QKIQ96PU8 341 aaKnown RBP eCLIP12.35□□□□□ -0.437e-7■■■■□ 20.6
CAPRIN1-202ENST00000389645 PIGVQ9NUD9 493 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 TMEM216Q9P0N5 145 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 VANGL2Q9ULK5 521 aa12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 HBS1LQ9Y450 684 aaKnown RBP12.35□□□□□ -0.43
CAPRIN1-202ENST00000389645 YJEFN3A6XGL0 299 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 E7ENQ6 273 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 PHGDHO43175 533 aaKnown RBP12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 MAP3K7O43318 606 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 GCATO75600 419 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 UBTFL6P0CB48 400 aaPredicted RBP12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 RALBP11234 206 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 FDFT1P37268 417 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 PDE1CQ14123 709 aaPredicted RBP12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 SLC25A52Q3SY17 297 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 PKDCCQ504Y2 493 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 TMEM154Q6P9G4 183 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 ZDHHC17Q8IUH5 632 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 ZNF276Q8N554 614 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 IPMKQ8NFU5 416 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 LRRC39Q96DD0 335 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 UBE2OQ9C0C9 1292 aaKnown RBP12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 THAP1Q9NVV9 213 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 MTMR10Q9NXD2 777 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 KCNK4Q9NYG8 393 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 TLK1Q9UKI8 766 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 MYBPHLA2RUH7 354 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 NRP1O14786 923 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 TSHRP16473 764 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 PIWIL2Q8TC59 973 aaKnown RBP12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 SREK1Q8WXA9 508 aaKnown RBP12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 WDCPQ9H6R7 721 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 CYLDQ9NQC7 956 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 NMRK1Q9NWW6 199 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 GDAP2Q9NXN4 497 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 PCDH10Q9P2E7 1040 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 DCXO43602 365 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 DNAJC6O75061 913 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 GLRA3O75311 464 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 TBX10O75333 385 aa12.34□□□□□ -0.43
CAPRIN1-202ENST00000389645 B3GAT3O94766 335 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms