RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 IMPAD1Q9NX62 359 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 TEKT2Q9UIF3 430 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 BTN3A1O00481 513 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 LRG1P02750 347 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 FGFR3P22607 806 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 PFKFB4Q16877 469 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 PGS1Q32NB8 556 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 ECHDC2Q86YB7 292 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 FAM126BQ8IXS8 530 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 TFAP2BQ92481 460 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 NSMCE2Q96MF7 247 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 NR1H4Q96RI1 486 aaPredicted RBP17.44■□□□□ 0.38
SGCB-201ENST00000381431 SHOX2O60902 331 aaPredicted RBP17.44■□□□□ 0.38
SGCB-201ENST00000381431 DAB1O75553 588 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 CDKN2BP42772 138 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 MAXP61244 160 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 ANKRD22Q5VYY1 191 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 LRRC8DQ7L1W4 858 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 ANKRD27Q96NW4 1050 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 DCUN1D5Q9BTE7 237 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 WDR41Q9HAD4 459 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 PARVBQ9HBI1 364 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 ENTPD7Q9NQZ7 604 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 KANSL1LA0AUZ9 987 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 PRR5-ARHGAP8B1AHC4 643 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 CPSF4O95639 269 aaKnown RBP17.44■□□□□ 0.38
SGCB-201ENST00000381431 PGK1P00558 417 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 FMO4P31512 558 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 MSX2P35548 267 aaPredicted RBP17.44■□□□□ 0.38
SGCB-201ENST00000381431 HALP42357 657 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 ARHGAP8P85298 464 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 IRGCQ6NXR0 463 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 DEFB128Q7Z7B8 93 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 PCSK9Q8NBP7 692 aaKnown RBP17.44■□□□□ 0.38
SGCB-201ENST00000381431 APOBEC3GQ9HC16 384 aaKnown RBP17.44■□□□□ 0.38
SGCB-201ENST00000381431 ACSS2Q9NR19 701 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 GRHL1Q9NZI5 618 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 MARCH2Q9P0N8 246 aa17.44■□□□□ 0.38
SGCB-201ENST00000381431 NRCAMQ92823 1304 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 AKR1A1P14550 325 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 CCNB1P14635 433 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 S100A5P33763 92 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 TRIM60Q495X7 471 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 C1orf127Q8N9H9 656 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 CLEC4DQ8WXI8 215 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 KCTD14Q9BQ13 255 aaPredicted RBP17.43■□□□□ 0.38
SGCB-201ENST00000381431 NMUR2Q9GZQ4 415 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 SENP6Q9GZR1 1112 aaPredicted RBP17.43■□□□□ 0.38
SGCB-201ENST00000381431 CAB39LQ9H9S4 337 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 STARD7Q9NQZ5 370 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 ARL8BQ9NVJ2 186 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 GEMIN8Q9NWZ8 242 aaKnown RBP17.43■□□□□ 0.38
SGCB-201ENST00000381431 MATKP42679 507 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 GRIA4P48058 902 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 SERPINH1P50454 418 aaKnown RBP17.43■□□□□ 0.38
SGCB-201ENST00000381431 NOMO1Q15155 1222 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 OTUB1Q96FW1 271 aaPredicted RBP17.43■□□□□ 0.38
SGCB-201ENST00000381431 RNF145Q96MT1 663 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 SYBUQ9NX95 663 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 PCDHA11Q9Y5I1 949 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 PSMD12O00232 456 aaPredicted RBP17.43■□□□□ 0.38
SGCB-201ENST00000381431 CLOCKO15516 846 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 PTGIRP43119 386 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 VAC14Q08AM6 782 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 PCID2Q5JVF3 399 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 SDHAF4Q5VUM1 108 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 CENPLQ8N0S6 344 aaPredicted RBP17.43■□□□□ 0.38
SGCB-201ENST00000381431 FIG4Q92562 907 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 FAM120BQ96EK7 910 aaKnown RBP17.43■□□□□ 0.38
SGCB-201ENST00000381431 DTNBP1Q96EV8 351 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 CIPCQ9C0C6 399 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 ST6GALNAC4Q9H4F1 302 aa17.43■□□□□ 0.38
SGCB-201ENST00000381431 DHX33Q9H6R0 707 aaKnown RBP17.43■□□□□ 0.38
SGCB-201ENST00000381431 SEMA4BQ9NPR2 832 aaPredicted RBP17.43■□□□□ 0.38
SGCB-201ENST00000381431 H7C4K7 107 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 GPR25O00155 361 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 B4GALT4O60513 344 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 SH3BGRLO75368 114 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 FSTL1Q12841 308 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 TAF5Q15542 800 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 TJAP1Q5JTD0 557 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 PATL1Q86TB9 770 aaKnown RBP17.42■□□□□ 0.38
SGCB-201ENST00000381431 ZNF398Q8TD17 642 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 NKD2Q969F2 451 aaPredicted RBP17.42■□□□□ 0.38
SGCB-201ENST00000381431 MBOAT7Q96N66 472 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 MMADHCQ9H3L0 296 aaPredicted RBP17.42■□□□□ 0.38
SGCB-201ENST00000381431 PNPOQ9NVS9 261 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 ZMYM5Q9UJ78 669 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 AP4S1Q9Y587 144 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 RAD54BQ9Y620 910 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 HNRNPLP14866 589 aaKnown RBP eCLIP17.42■□□□□ 0.38
SGCB-201ENST00000381431 POU1F1P28069 291 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 PBLDP30039 288 aaPredicted RBP17.42■□□□□ 0.38
SGCB-201ENST00000381431 CD86P42081 329 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 CCNG1P51959 295 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 CLNKQ7Z7G1 428 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 STK32CQ86UX6 486 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 C10orf107Q8IVU9 208 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 B4GALNT2Q8NHY0 566 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 LRRC15Q8TF66 581 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms