RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 DCAF6Q58WW2 860 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 MS4A13Q5J8X5 152 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 FOXR1Q6PIV2 292 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 INTS8Q75QN2 995 aaKnown RBP17.89■□□□□ 0.45
HMGN1-203ENST00000380748 TTC39CQ8N584 583 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 OR13H1Q8NG92 308 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 FRS2Q8WU20 508 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 AZIN2Q96A70 460 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 CCDC97Q96F63 343 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-203ENST00000380748 FCRL2Q96LA5 508 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-203ENST00000380748 SPAG5Q96R06 1193 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 CALN1Q9BXU9 219 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 TMEM8AQ9HCN3 771 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 FZD3Q9NPG1 666 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 CNGB3Q9NQW8 809 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 EXOC1Q9NV70 894 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 HESX1Q9UBX0 185 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 ENTPD2Q9Y5L3 495 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 K7ESM1 405 aa17.88■□□□□ 0.45
HMGN1-203ENST00000380748 PIK3R2O00459 728 aa17.88■□□□□ 0.45
HMGN1-203ENST00000380748 MAPK13O15264 365 aa17.88■□□□□ 0.45
HMGN1-203ENST00000380748 EFSO43281 561 aa17.88■□□□□ 0.45
HMGN1-203ENST00000380748 NEBLO76041 1014 aa17.88■□□□□ 0.45
HMGN1-203ENST00000380748 NEFLP07196 543 aa17.88■□□□□ 0.45
HMGN1-203ENST00000380748 DUSP3P51452 185 aaPredicted RBP17.88■□□□□ 0.45
HMGN1-203ENST00000380748 TAS2R38P59533 333 aa17.88■□□□□ 0.45
HMGN1-203ENST00000380748 ARL13BQ3SXY8 428 aa17.88■□□□□ 0.45
HMGN1-203ENST00000380748 ZNF542PQ5EBM4 170 aa17.88■□□□□ 0.45
HMGN1-203ENST00000380748 SCML4Q8N228 414 aa17.88■□□□□ 0.45
HMGN1-203ENST00000380748 CLEC4CQ8WTT0 213 aa17.88■□□□□ 0.45
HMGN1-203ENST00000380748 KCTD13Q8WZ19 329 aa17.88■□□□□ 0.45
HMGN1-203ENST00000380748 NOX5Q96PH1 765 aa17.88■□□□□ 0.45
HMGN1-203ENST00000380748 DDX50Q9BQ39 737 aaKnown RBP17.88■□□□□ 0.45
HMGN1-203ENST00000380748 XPO7Q9UIA9 1087 aaKnown RBP17.88■□□□□ 0.45
HMGN1-203ENST00000380748 PCDHGA8Q9Y5G5 932 aa17.88■□□□□ 0.45
HMGN1-203ENST00000380748 CALUO43852 315 aaPredicted RBP17.87■□□□□ 0.45
HMGN1-203ENST00000380748 RNGTTO60942 597 aaKnown RBP17.87■□□□□ 0.45
HMGN1-203ENST00000380748 MOCS2O96007 188 aaPredicted RBP17.87■□□□□ 0.45
HMGN1-203ENST00000380748 KRT13P13646 458 aa17.87■□□□□ 0.45
HMGN1-203ENST00000380748 RGS7P49802 495 aa17.87■□□□□ 0.45
HMGN1-203ENST00000380748 CDKN3Q16667 212 aa17.87■□□□□ 0.45
HMGN1-203ENST00000380748 SGO2Q562F6 1265 aa17.87■□□□□ 0.45
HMGN1-203ENST00000380748 GUSBP11Q6P575 273 aa17.87■□□□□ 0.45
HMGN1-203ENST00000380748 ATG14Q6ZNE5 492 aa17.87■□□□□ 0.45
HMGN1-203ENST00000380748 FAM186BQ8IYM0 893 aa17.87■□□□□ 0.45
HMGN1-203ENST00000380748 SLC22A18ASQ8N1D0 253 aa17.87■□□□□ 0.45
HMGN1-203ENST00000380748 ARRDC3Q96B67 414 aa17.87■□□□□ 0.45
HMGN1-203ENST00000380748 CCNL2Q96S94 520 aaPredicted RBP17.87■□□□□ 0.45
HMGN1-203ENST00000380748 ZSCAN16Q9H4T2 348 aaPredicted RBP17.87■□□□□ 0.45
HMGN1-203ENST00000380748 USP29Q9HBJ7 922 aa17.87■□□□□ 0.45
HMGN1-203ENST00000380748 PREBQ9HCU5 417 aa17.87■□□□□ 0.45
HMGN1-203ENST00000380748 STARD5Q9NSY2 213 aa17.87■□□□□ 0.45
HMGN1-203ENST00000380748 WDR70Q9NW82 654 aa17.87■□□□□ 0.45
HMGN1-203ENST00000380748 UNC79Q9P2D8 2635 aa17.87■□□□□ 0.45
HMGN1-203ENST00000380748 A0A1W2PQU0 124 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 SCAMP1O15126 338 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 LTFP02788 710 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 CD19P15391 556 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 PDGFRAP16234 1089 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 NR2F2P24468 414 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 NNMTP40261 264 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 CLDN2P57739 230 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 FAM46CQ5VWP2 391 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 KRT39Q6A163 491 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 CRTC1Q6UUV9 634 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 DSG4Q86SJ6 1040 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 CLEC14AQ86T13 490 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 LGI2Q8N0V4 545 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 OR8D1Q8WZ84 308 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 EEF2KMTQ96G04 330 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 FAXDC2Q96IV6 333 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 EVA1BQ9NVM1 165 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 TRAF3IP3Q9Y228 551 aa17.86■□□□□ 0.45
HMGN1-203ENST00000380748 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.85■□□□□ 0.45
HMGN1-203ENST00000380748 CPED1A4D0V7 1026 aa17.85■□□□□ 0.45
HMGN1-203ENST00000380748 NEMP2A6NFY4 417 aa17.85■□□□□ 0.45
HMGN1-203ENST00000380748 O00370 1275 aa17.85■□□□□ 0.45
HMGN1-203ENST00000380748 CASC3O15234 703 aaKnown RBP17.85■□□□□ 0.45
HMGN1-203ENST00000380748 SETSIPP0DME0 302 aa17.85■□□□□ 0.45
HMGN1-203ENST00000380748 RP1P56715 2156 aa17.85■□□□□ 0.45
HMGN1-203ENST00000380748 ZNF177Q13360 481 aaPredicted RBP17.85■□□□□ 0.45
HMGN1-203ENST00000380748 RAP1GAP2Q684P5 730 aa17.85■□□□□ 0.45
HMGN1-203ENST00000380748 GCNT7Q6ZNI0 430 aa17.85■□□□□ 0.45
HMGN1-203ENST00000380748 RBM44Q6ZP01 1051 aaKnown RBP17.85■□□□□ 0.45
HMGN1-203ENST00000380748 EFL1Q7Z2Z2 1120 aaKnown RBP17.85■□□□□ 0.45
HMGN1-203ENST00000380748 DQX1Q8TE96 717 aaKnown RBP17.85■□□□□ 0.45
HMGN1-203ENST00000380748 IRGQQ8WZA9 623 aa17.85■□□□□ 0.45
HMGN1-203ENST00000380748 EXTL1Q92935 676 aa17.85■□□□□ 0.45
HMGN1-203ENST00000380748 DUSP23Q9BVJ7 150 aa17.85■□□□□ 0.45
HMGN1-203ENST00000380748 DNAJC28Q9NX36 388 aa17.85■□□□□ 0.45
HMGN1-203ENST00000380748 RAB20Q9NX57 234 aa17.85■□□□□ 0.45
HMGN1-203ENST00000380748 PPM1HQ9ULR3 514 aa17.85■□□□□ 0.45
HMGN1-203ENST00000380748 RELNP78509 3460 aa17.85■□□□□ 0.45
HMGN1-203ENST00000380748 USP9XQ93008 2570 aaPredicted RBP17.85■□□□□ 0.45
HMGN1-203ENST00000380748 C1QTNF3-AMACRE9PGA6 284 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 SUV39H1O43463 412 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 TNFSF15O95150 251 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 YEATS4O95619 227 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 NTRK1P04629 796 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 FYNP06241 537 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms