RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 XPNPEP1Q9NQW7 623 aa6.71□□□□□ -1.33
RIPK1-202ENST00000380409 ATP11BQ9Y2G3 1177 aa6.71□□□□□ -1.33
RIPK1-202ENST00000380409 TCAF1Q9Y4C2 921 aa6.71□□□□□ -1.33
RIPK1-202ENST00000380409 PCDHAC2Q9Y5I4 1007 aa6.71□□□□□ -1.33
RIPK1-202ENST00000380409 ST14Q9Y5Y6 855 aa6.71□□□□□ -1.33
RIPK1-202ENST00000380409 ROBO3Q96MS0 1386 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 A0A087WXM4 84 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 EXOC1LA0A1B0GW35 172 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 CLDN25C9JDP6 229 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 TOMM70O94826 608 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 ACTN1P12814 892 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 MYF6P23409 242 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 NUMBP49757 651 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 KLF1Q13351 362 aaPredicted RBP6.71□□□□□ -1.34
RIPK1-202ENST00000380409 IKBKEQ14164 716 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 WDR44Q5JSH3 913 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 C9orf131Q5VYM1 1079 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 DCUN1D2Q6PH85 259 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 RNF207Q6ZRF8 634 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 DEPDC4Q8N2C3 294 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 TTLL6Q8N841 843 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 C2orf69Q8N8R5 385 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 IPCEF1Q8WWN9 437 aaPredicted RBP6.71□□□□□ -1.34
RIPK1-202ENST00000380409 TFAP2CQ92754 450 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 ZNF668Q96K58 619 aaPredicted RBP6.71□□□□□ -1.34
RIPK1-202ENST00000380409 ZNF778Q96MU6 729 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 SORT1Q99523 831 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 TM9SF2Q99805 663 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 CCDC77Q9BR77 488 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 WDR83Q9BRX9 315 aaKnown RBP6.71□□□□□ -1.34
RIPK1-202ENST00000380409 WDR12Q9GZL7 423 aaKnown RBP6.71□□□□□ -1.34
RIPK1-202ENST00000380409 SIRPGQ9P1W8 387 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 MYMKA6NI61 221 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 GPR25O00155 361 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 ATP2A1O14983 1001 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 AKAP10O43572 662 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 RNASEH2AO75792 299 aaKnown RBP6.71□□□□□ -1.34
RIPK1-202ENST00000380409 BMP1P13497 986 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 ITIH1P19827 911 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 GSTM2P28161 218 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 GRIA1P42261 906 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 MAGEA4P43358 317 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 HAAOP46952 286 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 RACK1P63244 317 aaKnown RBP6.71□□□□□ -1.34
RIPK1-202ENST00000380409 PLEKHG6Q3KR16 790 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 Q5BKY6 102 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 ZNF618Q5T7W0 954 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 PCGF5Q86SE9 256 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 BRSK2Q8IWQ3 736 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 AADATQ8N5Z0 425 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 PSD4Q8NDX1 1056 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 OR7D4Q8NG98 312 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 ALKBH8Q96BT7 664 aaKnown RBP6.71□□□□□ -1.34
RIPK1-202ENST00000380409 IL12RB2Q99665 862 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 C12orf65Q9H3J6 166 aaKnown RBP6.71□□□□□ -1.34
RIPK1-202ENST00000380409 STN1Q9H668 368 aaKnown RBP6.71□□□□□ -1.34
RIPK1-202ENST00000380409 MAGEE1Q9HCI5 957 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 TIGARQ9NQ88 270 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 GCNT4Q9P109 453 aa6.71□□□□□ -1.34
RIPK1-202ENST00000380409 CHORDC1Q9UHD1 332 aaPredicted RBP6.71□□□□□ -1.34
RIPK1-202ENST00000380409 CLUHO75153 1309 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 ZNF839A8K0R7 811 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 TK2O00142 265 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 PDHXO00330 501 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 POLRMTO00411 1230 aaKnown RBP6.7□□□□□ -1.34
RIPK1-202ENST00000380409 PPEF1O14829 653 aaPredicted RBP6.7□□□□□ -1.34
RIPK1-202ENST00000380409 SLURP2P0DP57 97 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 CYP3A5P20815 502 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 MATN1P21941 496 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 PIK3R1P27986 724 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 SSTR3P32745 418 aaPredicted RBP6.7□□□□□ -1.34
RIPK1-202ENST00000380409 OR3A3P47888 321 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 GPX6P59796 221 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 CBX2Q14781 532 aaPredicted RBP6.7□□□□□ -1.34
RIPK1-202ENST00000380409 SLC10A5Q5PT55 438 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.7□□□□□ -1.34
RIPK1-202ENST00000380409 BSPRYQ5W0U4 402 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 USP37Q86T82 979 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 METTL3Q86U44 580 aaKnown RBP6.7□□□□□ -1.34
RIPK1-202ENST00000380409 LINC00518Q8N0U6 118 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 DAGLBQ8NCG7 672 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 INTS12Q96CB8 462 aaKnown RBP6.7□□□□□ -1.34
RIPK1-202ENST00000380409 APOPT1Q96IL0 206 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 CEP170P1Q96L14 293 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 C9orf72Q96LT7 481 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 KLHL32Q96NJ5 620 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 ZBED2Q9BTP6 218 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 C20orf27Q9GZN8 174 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 WWP1Q9H0M0 922 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 THAP2Q9H0W7 228 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 ABCG4Q9H172 646 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 VPS33BQ9H267 617 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 NMRK2Q9NPI5 230 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 PKD2L2Q9NZM6 624 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 NXF1Q9UBU9 619 aaKnown RBP6.7□□□□□ -1.34
RIPK1-202ENST00000380409 SRRDQ9UH36 339 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 AGTPBP1Q9UPW5 1226 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 VWA7Q9Y334 891 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 AFG3L2Q9Y4W6 797 aa6.7□□□□□ -1.34
RIPK1-202ENST00000380409 UGT2A1Q9Y4X1 527 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms