RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 TMED10P49755 219 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 TMEM198Q66K66 360 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 TMEM214Q6NUQ4 689 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 AFG1LQ8WV93 481 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 DCUN1D1Q96GG9 259 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 SCYL1Q96KG9 808 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 KCTD15Q96SI1 283 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 NACA2Q9H009 215 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 DTLQ9NZJ0 730 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 KLHL8Q9P2G9 620 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 SOX13Q9UN79 622 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 CEPT1Q9Y6K0 416 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 STX16-NPEPL1H3BU86 382 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 RNF103O00237 685 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 PHGDHO43175 533 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 PEX1O43933 1283 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 MFSD11O43934 449 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 EPHA3P29320 983 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 PTPN7P35236 360 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 COPAP53621 1224 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 SNAPC2Q13487 334 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 STILQ15468 1287 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 TGFBIQ15582 683 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 PDPK2PQ6A1A2 396 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 FRMD7Q6ZUT3 714 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 ZNF534Q76KX8 674 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 ZNF781Q8N8C0 355 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 FNIP1Q8TF40 1166 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 ATP2A3Q93084 1043 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 PPCSQ9HAB8 311 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 TBCCD1Q9NVR7 557 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 C19orf81C9J6K1 198 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 CHRNGP07510 517 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 ENO3P13929 434 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 ARL4AP40617 200 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 SLC6A3Q01959 620 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 ZNF460Q14592 562 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 TEDDM1Q5T9Z0 273 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 DCLK2Q8N568 766 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 CCNYL1Q8N7R7 359 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 SLC2A14Q8TDB8 520 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 HTR3CQ8WXA8 447 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 MFSD3Q96ES6 412 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 DHRS1Q96LJ7 313 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 ZMAT2Q96NC0 199 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 CSPG4P5Q96PW8 444 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 OMDQ99983 421 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 HEPHQ9BQS7 1158 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 MRPS26Q9BYN8 205 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 BCO2Q9BYV7 579 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 FZD8Q9H461 694 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 PDZD7Q9H5P4 517 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 THAP1Q9NVV9 213 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 NME7Q9Y5B8 376 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 AP4B1Q9Y6B7 739 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 TMX2-CTNND1H3BSU7 103 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 CRTAMO95727 393 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 OXSR1O95747 527 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 CYP2C8P10632 490 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 RALBP11234 206 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 ALDH1A3P47895 512 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 SULT1E1P49888 294 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 KPNA1P52294 538 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 PFKPQ01813 784 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 PACS1Q6VY07 963 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 RNF135Q8IUD6 432 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 DEFB106AQ8N104 65 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 ZSCAN18Q8TBC5 510 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 GRIN3AQ8TCU5 1115 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 C2orf40Q9H1Z8 148 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 ATXN3LQ9H3M9 355 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 PRDM12Q9H4Q4 367 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 SSU72Q9NP77 194 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 MCM3APO60318 1980 aa12.72□□□□□ -0.37
PRPF40B-202ENST00000380281 C1QAP02745 245 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 CPOXP36551 454 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 NUDT2P50583 147 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 RBP5P82980 135 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 ATP1A4Q13733 1029 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 SLC9B1Q4ZJI4 515 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 CELF3Q5SZQ8 465 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 CERCAMQ5T4B2 595 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 AAGABQ6PD74 315 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 ELMSAN1Q6PJG2 1045 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 POTEHQ6S545 545 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 LBX2Q6XYB7 198 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 RPS27LQ71UM5 84 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 FASTKD5Q7L8L6 764 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 STRA8Q7Z7C7 330 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 DNERQ8NFT8 737 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 CELF6Q96J87 481 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 ZNF512Q96ME7 567 aaPredicted RBP12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 HNRNPABQ99729 332 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 EIF2AQ9BY44 585 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 ZNF408Q9H9D4 720 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 PTPRHQ9HD43 1115 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 TRNAU1APQ9NX07 287 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 SIRPGQ9P1W8 387 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 EMCNQ9ULC0 261 aa12.71□□□□□ -0.37
PRPF40B-202ENST00000380281 SLC39A10Q9ULF5 831 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms