RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 NPWQ8N729 165 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 STKLD1Q8NE28 680 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 ARMC2Q8NEN0 867 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 DQX1Q8TE96 717 aaKnown RBP22.03■■□□□ 1.12
TRIM54-202ENST00000380075 DCTN4Q9UJW0 460 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 F5H423 210 aaPredicted RBP22.02■■□□□ 1.12
TRIM54-202ENST00000380075 PSMD3O43242 534 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 GLRA3O75311 464 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 LRIG2O94898 1065 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 DLDP09622 509 aaKnown RBP22.02■■□□□ 1.12
TRIM54-202ENST00000380075 EPHB2P29323 1055 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 DEFB103AP81534 67 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 TEX44Q53QW1 395 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 KCTD11Q693B1 232 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 C4orf50Q6ZRC1 276 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 CLNKQ7Z7G1 428 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 NUDCD3Q8IVD9 361 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 NETO2Q8NC67 525 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 CASS4Q9NQ75 786 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 KANSL3Q9P2N6 904 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 BAIAP2L1Q9UHR4 511 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 LNPEPQ9UIQ6 1025 aa22.02■■□□□ 1.12
TRIM54-202ENST00000380075 A0A0G2JND7 137 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 MAGEB16A2A368 324 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 BMP8BP34820 402 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 CRADDP78560 199 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 TAF1BQ53T94 588 aaPredicted RBP22.01■■□□□ 1.11
TRIM54-202ENST00000380075 SLC24A5Q71RS6 500 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 TMCO2Q7Z6W1 182 aaPredicted RBP22.01■■□□□ 1.11
TRIM54-202ENST00000380075 TP53INP2Q8IXH6 220 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 KIF2BQ8N4N8 673 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 RNF34Q969K3 372 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 CERS2Q96G23 380 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 CPNE1Q99829 537 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 RHOBTB2Q9BYZ6 727 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 ARHGEF38Q9NXL2 777 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 ZFATQ9P243 1243 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 TXNDC16Q9P2K2 825 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 DCDC2Q9UHG0 476 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 ADAM28Q9UKQ2 775 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 VANGL2Q9ULK5 521 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 EFCAB14O75071 495 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 BPGMP07738 259 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 GP5P40197 560 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 NPY2RP49146 381 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 TMPRSS15P98073 1019 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 EIF4EBP2Q13542 120 aaPredicted RBP22.01■■□□□ 1.11
TRIM54-202ENST00000380075 INSCQ1MX18 579 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 GRTP1Q5TC63 336 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 RASIP1Q5U651 963 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 MTDHQ86UE4 582 aaKnown RBP22.01■■□□□ 1.11
TRIM54-202ENST00000380075 ZNF598Q86UK7 904 aaKnown RBP22.01■■□□□ 1.11
TRIM54-202ENST00000380075 RASSF3Q86WH2 238 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 OR10T2Q8NGX3 314 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 HAPLN3Q96S86 360 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 ABCC13Q9NSE7 274 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 PCDHB8Q9UN66 801 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 RPS6KL1Q9Y6S9 549 aa22.01■■□□□ 1.11
TRIM54-202ENST00000380075 ZBTB24O43167 697 aaPredicted RBP22■■□□□ 1.11
TRIM54-202ENST00000380075 USP1O94782 785 aa22■■□□□ 1.11
TRIM54-202ENST00000380075 AMHP03971 560 aa22■■□□□ 1.11
TRIM54-202ENST00000380075 ATP5BP06576 529 aaKnown RBP22■■□□□ 1.11
TRIM54-202ENST00000380075 TARSP26639 723 aaKnown RBP22■■□□□ 1.11
TRIM54-202ENST00000380075 PRPSAP1Q14558 356 aa22■■□□□ 1.11
TRIM54-202ENST00000380075 TMEM135Q86UB9 458 aa22■■□□□ 1.11
TRIM54-202ENST00000380075 TSGA13Q96PP4 275 aa22■■□□□ 1.11
TRIM54-202ENST00000380075 GORASP1Q9BQQ3 440 aa22■■□□□ 1.11
TRIM54-202ENST00000380075 TMEM120AQ9BXJ8 343 aa22■■□□□ 1.11
TRIM54-202ENST00000380075 PRO3102Q9H379 93 aa22■■□□□ 1.11
TRIM54-202ENST00000380075 KCNK13Q9HB14 408 aa22■■□□□ 1.11
TRIM54-202ENST00000380075 TMLHEQ9NVH6 421 aa22■■□□□ 1.11
TRIM54-202ENST00000380075 KCNK4Q9NYG8 393 aa22■■□□□ 1.11
TRIM54-202ENST00000380075 INPP5FQ9Y2H2 1132 aa22■■□□□ 1.11
TRIM54-202ENST00000380075 ITGA2BP08514 1039 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 T-ENOLP0DO92 83 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 FAM189BP81408 668 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 PAN2Q504Q3 1202 aaKnown RBP21.99■■□□□ 1.11
TRIM54-202ENST00000380075 FAM91A1Q658Y4 838 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 FAM43BQ6ZT52 329 aaPredicted RBP21.99■■□□□ 1.11
TRIM54-202ENST00000380075 LZTR1Q8N653 840 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.99■■□□□ 1.11
TRIM54-202ENST00000380075 OR52K1Q8NGK4 314 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 SKA1Q96BD8 255 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 TEKT5Q96M29 485 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 HEY2Q9UBP5 337 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 TRIM33Q9UPN9 1127 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 SLC4A7Q9Y6M7 1214 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 FGF10O15520 208 aaPredicted RBP21.99■■□□□ 1.11
TRIM54-202ENST00000380075 IRAK2O43187 625 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 WFS1O76024 890 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 HAUS5O94927 633 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 OCRLQ01968 901 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 BST1Q10588 318 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 CHI3L2Q15782 390 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 CTC1Q2NKJ3 1217 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 LRRTM3Q86VH5 581 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 SPATA2LQ8IUW3 424 aaPredicted RBP21.99■■□□□ 1.11
TRIM54-202ENST00000380075 KLHDC8BQ8IXV7 354 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 CD248Q9HCU0 757 aa21.99■■□□□ 1.11
TRIM54-202ENST00000380075 HAO1Q9UJM8 370 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms