RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 CERCAMQ5T4B2 595 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 CYB5D1Q6P9G0 228 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 KIF2BQ8N4N8 673 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 CNTD1Q8N815 330 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 DPF3Q92784 378 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 RSRC1Q96IZ7 334 aaKnown RBP15.18■□□□□ 0.02
PRNP-201ENST00000379440 FCRL2Q96LA5 508 aaPredicted RBP15.18■□□□□ 0.02
PRNP-201ENST00000379440 TEKT5Q96M29 485 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 FAM193BQ96PV7 902 aaPredicted RBP15.18■□□□□ 0.02
PRNP-201ENST00000379440 BRD8Q9H0E9 1235 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 KANSL3Q9P2N6 904 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.18■□□□□ 0.02
PRNP-201ENST00000379440 INHAP05111 366 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 POLBP06746 335 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 TPH1P17752 444 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 CCR1P32246 355 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 GATMP50440 423 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 ZNF135P52742 658 aaPredicted RBP15.18■□□□□ 0.02
PRNP-201ENST00000379440 DBN1Q16643 649 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 FYB2Q5VWT5 728 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 BEND5Q7L4P6 421 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 CCNJLQ8IV13 435 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 TTC9BQ8N6N2 239 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 B4GALNT2Q8NHY0 566 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 CDKL2Q92772 493 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 SMOC2Q9H3U7 446 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 HCSTQ9UBK5 93 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 VANGL2Q9ULK5 521 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 ATP9BO43861 1147 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 ALDOAP04075 364 aaKnown RBP15.17■□□□□ 0.02
PRNP-201ENST00000379440 USP46P62068 366 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 IRX4P78413 519 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 DEFB115Q30KQ5 88 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 VARS2Q5ST30 1063 aaKnown RBP15.17■□□□□ 0.02
PRNP-201ENST00000379440 ARTNQ5T4W7 220 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 ARHGAP12Q8IWW6 846 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 LRRC37BQ96QE4 947 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 HAPLN3Q96S86 360 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 NAT9Q9BTE0 207 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 TRIM62Q9BVG3 475 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 CASS4Q9NQ75 786 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 CREBZFQ9NS37 354 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 TRHDEQ9UKU6 1024 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 NUMBLQ9Y6R0 609 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 MTSS1O43312 755 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 SOAT2O75908 522 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 CCDC15Q0P6D6 951 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 USP4Q13107 963 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 BRMS1LQ5PSV4 323 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 THEMIS2Q5TEJ8 643 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 CES4AQ5XG92 561 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 NLRP9Q7RTR0 991 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 C14orf80Q86SX3 495 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 RASSF3Q86WH2 238 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 SLC43A3Q8NBI5 491 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 ATAD1Q8NBU5 361 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 ZNF669Q96BR6 464 aaPredicted RBP15.17■□□□□ 0.02
PRNP-201ENST00000379440 CERS2Q96G23 380 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 ZNF419Q96HQ0 510 aaPredicted RBP15.17■□□□□ 0.02
PRNP-201ENST00000379440 SLC39A8Q9C0K1 460 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 BFARQ9NZS9 450 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 MPP6Q9NZW5 540 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 ZFATQ9P243 1243 aa15.17■□□□□ 0.02
PRNP-201ENST00000379440 A0A0G2JND7 137 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 CCDC195A0A1B0GUA6 201 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 ALDH3A1P30838 453 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 CRHR1P34998 444 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 GMPRP36959 345 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 ARPP19P56211 112 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 ELF3P78545 371 aaPredicted RBP15.16■□□□□ 0.02
PRNP-201ENST00000379440 C16orf46Q6P387 395 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 TIFABQ6ZNK6 161 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 TRIM42Q8IWZ5 723 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 DCP1BQ8IZD4 617 aaKnown RBP15.16■□□□□ 0.02
PRNP-201ENST00000379440 SPATA22Q8NHS9 363 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 MFSD3Q96ES6 412 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 ZNF395Q9H8N7 513 aaPredicted RBP15.16■□□□□ 0.02
PRNP-201ENST00000379440 PATJQ8NI35 1801 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 TMEM189-UBE2V1I3L0A0 370 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 TPP1O14773 563 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 NBNO60934 754 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 TROVE2P10155 538 aaKnown RBP eCLIP15.16■□□□□ 0.025e-6■■□□□ 11.5
PRNP-201ENST00000379440 CYP2C18P33260 490 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 TUBP50607 506 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 GPNMBQ14956 572 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 FAM171A1Q5VUB5 890 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 ITPRIPL1Q6GPH6 555 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 LRRC8DQ7L1W4 858 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 NUP93Q8N1F7 819 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 DBF4BQ8NFT6 615 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 APBB2Q92870 758 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 KLHL29Q96CT2 875 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 VAT1Q99536 393 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 TSEN34Q9BSV6 310 aaKnown RBP15.16■□□□□ 0.02
PRNP-201ENST00000379440 GPR62Q9BZJ7 368 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 LRRC40Q9H9A6 602 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 HMX1Q9NP08 348 aaPredicted RBP15.16■□□□□ 0.02
PRNP-201ENST00000379440 CHRAC1Q9NRG0 131 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 HS3ST4Q9Y661 456 aa15.16■□□□□ 0.02
PRNP-201ENST00000379440 CCDC78A2IDD5 438 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms